RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 A0A087WWL8 130 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 GCOM1H8Y6P7 765 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 M0QYG6 137 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 MYO1FO00160 1098 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 SUV39H1O43463 412 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 GRPP07492 148 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 GRIA3P42263 894 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 PHKA1P46020 1223 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 SLC11A2P49281 568 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 SIM1P81133 766 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 MC2RQ01718 297 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ARHGAP29Q52LW3 1261 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 STRIP1Q5VSL9 837 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ICE2Q659A1 982 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 KAZNQ674X7 775 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 LMBRD2Q68DH5 695 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 CYB5RLQ6IPT4 315 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 SLC30A10Q6XR72 485 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ZNF783Q6ZMS7 281 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 CERS3Q8IU89 383 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 SLC44A3Q8N4M1 653 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 B3GALNT2Q8NCR0 500 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 FAM46DQ8NEK8 389 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 LPIN2Q92539 896 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 FAM136AQ96C01 138 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 NMD3Q96D46 503 aaKnown RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ZG16BQ96DA0 208 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 PBKQ96KB5 322 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 MESP1Q9BRJ9 268 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 B3GNT5Q9BYG0 378 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ATP6V0A4Q9HBG4 840 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 XPNPEP3Q9NQH7 507 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 GEMIN8Q9NWZ8 242 aaKnown RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 XPR1Q9UBH6 696 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 NOB1Q9ULX3 412 aaKnown RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 G3BP2Q9UN86 482 aaKnown RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 SHOC2Q9UQ13 582 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-223ENST00000628857 TMX2Q9Y320 296 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ENTPD2Q9Y5L3 495 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 COX11Q9Y6N1 276 aa3.8□□□□□ -1.8
CNOT1-223ENST00000628857 ADGRA2Q96PE1 1338 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 SALL3Q9BXA9 1300 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 CLSPNQ9HAW4 1339 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 MYO1CO00159 1063 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 BTN3A1O00481 513 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 TBC1D4O60343 1298 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 TLR5O60602 858 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 UNC5CO95185 931 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 ONECUT2O95948 504 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 NPR1P16066 1061 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 PPP3CBP16298 524 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 CD6P30203 668 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 PXNP49023 591 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-223ENST00000628857 HNRNPMP52272 730 aaKnown RBP eCLIP3.79□□□□□ -1.8
CNOT1-223ENST00000628857 FAM193AP78312 1265 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 RAB32Q13637 225 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 BMPR2Q13873 1038 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 SLC44A4Q53GD3 710 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 PLAC9Q5JTB6 97 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 RBM20Q5T481 1227 aaKnown RBP3.79□□□□□ -1.8
CNOT1-223ENST00000628857 DARS2Q6PI48 645 aaKnown RBP3.79□□□□□ -1.8
CNOT1-223ENST00000628857 LAYNQ6UX15 382 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 MYCBPAPQ8TBZ2 947 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 ACTRT2Q8TDY3 377 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 FBXL20Q96IG2 436 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 DUSP26Q9BV47 211 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 C22orf23Q9BZE7 217 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 ZNF518BQ9C0D4 1074 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 SMOC2Q9H3U7 446 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 ARMT1Q9H993 441 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 ZMAT3Q9HA38 289 aaKnown RBP3.79□□□□□ -1.8
CNOT1-223ENST00000628857 OBP2AQ9NY56 170 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 EHD3Q9NZN3 535 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 ZNHIT2Q9UHR6 403 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 TPCN1Q9ULQ1 816 aa3.79□□□□□ -1.8
CNOT1-223ENST00000628857 FOXN3O00409 490 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 GOLIM4O00461 696 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 DCLK1O15075 740 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 PPFIA2O75334 1257 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 NXPH3O95157 252 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 BMP5P22003 454 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 CLK3P49761 638 aaKnown RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 IRX6P78412 446 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 NHLH1Q02575 133 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 BOP1Q14137 746 aaKnown RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 E2F2Q14209 437 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 POLD3Q15054 466 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 CNN3Q15417 329 aaKnown RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 TXNRD1Q16881 649 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 ZNF618Q5T7W0 954 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 MTHFD1LQ6UB35 978 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 TMEM108Q6UXF1 575 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 WDR53Q7Z5U6 358 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 FAM98AQ8NCA5 519 aaKnown RBP3.78□□□□□ -1.8
CNOT1-223ENST00000628857 ATRIPQ8WXE1 791 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 RFKQ969G6 155 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 TTC17Q96AE7 1141 aa3.78□□□□□ -1.8
CNOT1-223ENST00000628857 APIPQ96GX9 242 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms