RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 NOC3LQ8WTT2 800 aaKnown RBP20.43■□□□□ 0.86
SMN2-215ENST00000628696 USP13Q92995 863 aaPredicted RBP20.43■□□□□ 0.86
SMN2-215ENST00000628696 HVCN1Q96D96 273 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 SAAL1Q96ER3 474 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 EBF3Q9H4W6 596 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 ZMYM5Q9UJ78 669 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 EXOC7Q9UPT5 735 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 CCL26Q9Y258 94 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 CLIC4Q9Y696 253 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 SPAG17Q6Q759 2223 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 OBSL1O75147 1896 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 SLC30A4O14863 429 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 HMGA1P17096 107 aaKnown RBP20.42■□□□□ 0.86
SMN2-215ENST00000628696 DDX6P26196 483 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMN2-215ENST00000628696 PNPLA4P41247 253 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 PXNP49023 591 aaPredicted RBP20.42■□□□□ 0.86
SMN2-215ENST00000628696 WNT7BP56706 349 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 GRSF1Q12849 480 aaKnown RBP eCLIP20.42■□□□□ 0.86
SMN2-215ENST00000628696 NFE2Q16621 373 aaPredicted RBP20.42■□□□□ 0.86
SMN2-215ENST00000628696 RRAGBQ5VZM2 374 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 CC2D1AQ6P1N0 951 aaPredicted RBP20.42■□□□□ 0.86
SMN2-215ENST00000628696 WDR5BQ86VZ2 330 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 SYCP3Q8IZU3 236 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 TTC16Q8NEE8 873 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 ZSWIM2Q8NEG5 633 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 MRPS31Q92665 395 aaKnown RBP20.42■□□□□ 0.86
SMN2-215ENST00000628696 ACCSQ96QU6 501 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 FAM83CQ9BQN1 747 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 HPS4Q9NQG7 708 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 STK17AQ9UEE5 414 aa20.42■□□□□ 0.86
SMN2-215ENST00000628696 MYMKA6NI61 221 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 AXIN1O15169 862 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 HUS1O60921 280 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 PPP1R37O75864 691 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 GCNT3O95395 438 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 ITGB3P05106 788 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 CSH1P0DML2 217 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 CSH2P0DML3 217 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 GAP43P17677 238 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 ACAT1P24752 427 aaKnown RBP20.41■□□□□ 0.86
SMN2-215ENST00000628696 DDR2Q16832 855 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 FSTL4Q6MZW2 842 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 PKN3Q6P5Z2 889 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 SV2BQ7L1I2 683 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 PDCL2Q8N4E4 241 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
SMN2-215ENST00000628696 TDP1Q9NUW8 608 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 DDX43Q9NXZ2 648 aaKnown RBP20.41■□□□□ 0.86
SMN2-215ENST00000628696 SEL1LQ9UBV2 794 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 SLC8A2Q9UPR5 921 aa20.41■□□□□ 0.86
SMN2-215ENST00000628696 GOLGA8IPA6NC78 632 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 OTOL1A6NHN0 477 aaPredicted RBP20.4■□□□□ 0.86
SMN2-215ENST00000628696 GOLGA8JA6NMD2 632 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 GDF9O60383 454 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 IDEP14735 1019 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 ARSAP15289 507 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 KCNA4P22459 653 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 CYP2F1P24903 491 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 HOXA6P31267 233 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 RPL10AP62906 217 aaKnown RBP20.4■□□□□ 0.86
SMN2-215ENST00000628696 CACNA1BQ00975 2339 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 MYL7Q01449 175 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 TMEM196Q5HYL7 178 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 PPM1JQ5JR12 505 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 L1TD1Q5T7N2 865 aaKnown RBP20.4■□□□□ 0.86
SMN2-215ENST00000628696 MON1AQ86VX9 555 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 CSGALNACT2Q8N6G5 542 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 FAM84AQ96KN4 292 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 STRA6Q9BX79 667 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 KIF9Q9HAQ2 790 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 RBAKQ9NYW8 714 aaPredicted RBP20.4■□□□□ 0.86
SMN2-215ENST00000628696 L1RE1Q9UN81 338 aa20.4■□□□□ 0.86
SMN2-215ENST00000628696 ATG13O75143 517 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 KRT19P08727 400 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 TXLNAP40222 546 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 AMPD2Q01433 879 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 CEBPZQ03701 1054 aaKnown RBP20.39■□□□□ 0.85
SMN2-215ENST00000628696 BRSK2Q8IWQ3 736 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 C1orf127Q8N9H9 656 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 DNAJC19Q96DA6 116 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 CLIC6Q96NY7 704 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 ACBD6Q9BR61 282 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 PANK2Q9BZ23 570 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 ARRDC1-AS1Q9H2J1 176 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 PCIF1Q9H4Z3 704 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 TRPC7Q9HCX4 862 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 FBXO2Q9UK22 296 aaPredicted RBP20.39■□□□□ 0.85
SMN2-215ENST00000628696 GTF3C4Q9UKN8 822 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 PCDHB13Q9Y5F0 798 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 GREB1Q4ZG55 1949 aa20.39■□□□□ 0.85
SMN2-215ENST00000628696 TRDMT1O14717 391 aaKnown RBP20.38■□□□□ 0.85
SMN2-215ENST00000628696 RPP40O75818 363 aaKnown RBP20.38■□□□□ 0.85
SMN2-215ENST00000628696 LDHAP00338 332 aaKnown RBP20.38■□□□□ 0.85
SMN2-215ENST00000628696 EGFP01133 1207 aa20.38■□□□□ 0.85
SMN2-215ENST00000628696 CASP5P51878 434 aa20.38■□□□□ 0.85
SMN2-215ENST00000628696 CCDC6Q16204 474 aa20.38■□□□□ 0.85
SMN2-215ENST00000628696 INTS6LQ5JSJ4 861 aaKnown RBP20.38■□□□□ 0.85
SMN2-215ENST00000628696 SCARA3Q6AZY7 606 aa20.38■□□□□ 0.85
SMN2-215ENST00000628696 GAB3Q8WWW8 586 aa20.38■□□□□ 0.85
SMN2-215ENST00000628696 FBRSL1Q9HCM7 1045 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms