RNA–Protein interactions for RNA: ENST00000627568.2

TCF4-259, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-259ENST00000627568 LHX1P48742 406 aa27.53■■■□□ 2
TCF4-259ENST00000627568 KPNA1P52294 538 aaPredicted RBP27.53■■■□□ 2
TCF4-259ENST00000627568 C1orf228Q6PIY5 440 aa27.53■■■□□ 2
TCF4-259ENST00000627568 HS2ST1Q7LGA3 356 aa27.53■■■□□ 2
TCF4-259ENST00000627568 GPIHBP1Q8IV16 184 aa27.53■■■□□ 2
TCF4-259ENST00000627568 WDR49Q8IV35 697 aa27.53■■■□□ 2
TCF4-259ENST00000627568 SPRYD3Q8NCJ5 442 aa27.53■■■□□ 2
TCF4-259ENST00000627568 IL21Q9HBE4 155 aa27.53■■■□□ 2
TCF4-259ENST00000627568 ABCB6Q9NP58 842 aa27.53■■■□□ 2
TCF4-259ENST00000627568 AGPAT3Q9NRZ7 376 aa27.53■■■□□ 2
TCF4-259ENST00000627568 ZNF638Q14966 1978 aaKnown RBP27.52■■■□□ 2
TCF4-259ENST00000627568 DENND4CQ5VZ89 1909 aa27.52■■■□□ 2
TCF4-259ENST00000627568 ARNTLO00327 626 aa27.52■■■□□ 2
TCF4-259ENST00000627568 KINO60870 393 aaKnown RBP27.52■■■□□ 2
TCF4-259ENST00000627568 CSH1P0DML2 217 aa27.52■■■□□ 2
TCF4-259ENST00000627568 CSH2P0DML3 217 aa27.52■■■□□ 2
TCF4-259ENST00000627568 WEE1P30291 646 aa27.52■■■□□ 2
TCF4-259ENST00000627568 HOXD13P35453 343 aa27.52■■■□□ 2
TCF4-259ENST00000627568 RPL10AP62906 217 aaKnown RBP27.52■■■□□ 2
TCF4-259ENST00000627568 ARHGAP29Q52LW3 1261 aa27.52■■■□□ 2
TCF4-259ENST00000627568 RESP18Q5W5W9 173 aa27.52■■■□□ 2
TCF4-259ENST00000627568 NELFCDQ8IXH7 590 aa27.52■■■□□ 2
TCF4-259ENST00000627568 CEP57L1Q8IYX8 460 aa27.52■■■□□ 2
TCF4-259ENST00000627568 OR5B17Q8NGF7 314 aa27.52■■■□□ 2
TCF4-259ENST00000627568 HPDLQ96IR7 371 aa27.52■■■□□ 2
TCF4-259ENST00000627568 IER2Q9BTL4 223 aa27.52■■■□□ 2
TCF4-259ENST00000627568 BLZF1Q9H2G9 400 aa27.52■■■□□ 2
TCF4-259ENST00000627568 C8orf33Q9H7E9 229 aaPredicted RBP27.52■■■□□ 2
TCF4-259ENST00000627568 PTPRJQ12913 1337 aa27.51■■□□□ 1.99
TCF4-259ENST00000627568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.51■■□□□ 1.99
TCF4-259ENST00000627568 PRAMEF12O95522 483 aa27.51■■□□□ 1.99
TCF4-259ENST00000627568 CYP2J2P51589 502 aa27.51■■□□□ 1.99
TCF4-259ENST00000627568 MLLT6P55198 1093 aaPredicted RBP27.51■■□□□ 1.99
TCF4-259ENST00000627568 SNRPFP62306 86 aaKnown RBP27.51■■□□□ 1.99
TCF4-259ENST00000627568 SNRNP35Q16560 246 aaKnown RBP27.51■■□□□ 1.99
TCF4-259ENST00000627568 DPH6Q7L8W6 267 aa27.51■■□□□ 1.99
TCF4-259ENST00000627568 BPIFB1Q8TDL5 484 aa27.51■■□□□ 1.99
TCF4-259ENST00000627568 FNBP1Q96RU3 617 aa27.51■■□□□ 1.99
TCF4-259ENST00000627568 MAGED2Q9UNF1 606 aaPredicted RBP27.51■■□□□ 1.99
TCF4-259ENST00000627568 SLC38A8A6NNN8 435 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 CCNE1P24864 410 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 DDX6P26196 483 aaKnown RBP eCLIP27.5■■□□□ 1.99
TCF4-259ENST00000627568 AVPR1AP37288 418 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 AFMP43652 599 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 PLCB2Q00722 1185 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 DNM1Q05193 864 aaKnown RBP27.5■■□□□ 1.99
TCF4-259ENST00000627568 MTAPQ13126 283 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 FZD5Q13467 585 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 PKP1Q13835 747 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 SOWAHAQ2M3V2 549 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 SCARA3Q6AZY7 606 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 SPATA2LQ8IUW3 424 aaPredicted RBP27.5■■□□□ 1.99
TCF4-259ENST00000627568 RDH13Q8NBN7 331 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 HINFPQ9BQA5 517 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 CHRDQ9H2X0 955 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 THG1LQ9NWX6 298 aaKnown RBP27.5■■□□□ 1.99
TCF4-259ENST00000627568 UXTQ9UBK9 157 aaPredicted RBP27.5■■□□□ 1.99
TCF4-259ENST00000627568 GTF3C4Q9UKN8 822 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 PCDHGA2Q9Y5H1 932 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 SPTBN4Q9H254 2564 aa27.5■■□□□ 1.99
TCF4-259ENST00000627568 PVALEFA0A1B0GWK0 134 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 GABRDO14764 452 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 TGFB1I1O43294 461 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 DLATP10515 647 aaKnown RBP27.49■■□□□ 1.99
TCF4-259ENST00000627568 TNNI1P19237 187 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 CASP1P29466 404 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 GPR15P49685 360 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 NLRP12P59046 1061 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 EHHADHQ08426 723 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 PPP2R5DQ14738 602 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 OSTM1Q86WC4 334 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 CMTM8Q8IZV2 173 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 ZNF687Q8N1G0 1237 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 CELF5Q8N6W0 485 aaKnown RBP27.49■■□□□ 1.99
TCF4-259ENST00000627568 XXYLT1Q8NBI6 393 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 SCFD1Q8WVM8 642 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 ATRIPQ8WXE1 791 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 MRPS31Q92665 395 aaKnown RBP27.49■■□□□ 1.99
TCF4-259ENST00000627568 LMAN1LQ9HAT1 526 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 PRMT8Q9NR22 394 aaPredicted RBP27.49■■□□□ 1.99
TCF4-259ENST00000627568 OBSL1O75147 1896 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 OTOGLQ3ZCN5 2332 aa27.49■■□□□ 1.99
TCF4-259ENST00000627568 CLIC2O15247 247 aa27.48■■□□□ 1.99
TCF4-259ENST00000627568 HMGA1P17096 107 aaKnown RBP27.48■■□□□ 1.99
TCF4-259ENST00000627568 CYP2F1P24903 491 aa27.48■■□□□ 1.99
TCF4-259ENST00000627568 CFAP221Q4G0U5 840 aa27.48■■□□□ 1.99
TCF4-259ENST00000627568 FUBP3Q96I24 572 aaKnown RBP eCLIP27.48■■□□□ 1.99
TCF4-259ENST00000627568 PKMYT1Q99640 499 aa27.48■■□□□ 1.99
TCF4-259ENST00000627568 SLC46A2Q9BY10 475 aa27.48■■□□□ 1.99
TCF4-259ENST00000627568 SLC39A2Q9NP94 309 aa27.48■■□□□ 1.99
TCF4-259ENST00000627568 CGNQ9P2M7 1197 aaKnown RBP27.48■■□□□ 1.99
TCF4-259ENST00000627568 CUL4BQ13620 913 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 LRRC32Q14392 662 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 PSMD6Q15008 389 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 DDR2Q16832 855 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 SDHAF4Q5VUM1 108 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 C4orf50Q6ZRC1 276 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 TRAPPC11Q7Z392 1133 aa27.47■■□□□ 1.99
TCF4-259ENST00000627568 RALGPS2Q86X27 583 aaPredicted RBP27.47■■□□□ 1.99
TCF4-259ENST00000627568 MAB21L3Q8N8X9 362 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms