RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 NKX6-1P78426 367 aaPredicted RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 EXOSC9Q06265 439 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 SLC10A2Q12908 348 aaPredicted RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 LLGL1Q15334 1064 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 CXorf57Q6NSI4 855 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 SLC30A10Q6XR72 485 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 DAAM2Q86T65 1068 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 ZBTB34Q8NCN2 500 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 PPP1R35Q8TAP8 253 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 SLC35G2Q8TBE7 412 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 SSH3Q8TE77 659 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 RPL36ALQ969Q0 106 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 ZNF48Q96MX3 618 aaPredicted RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 ACO2Q99798 780 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 CNPPD1Q9BV87 410 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 TINAGL1Q9GZM7 467 aaPredicted RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 SIK2Q9H0K1 926 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 GPR35Q9HC97 309 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 CPNE5Q9HCH3 593 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 SARS2Q9NP81 518 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 STAP2Q9UGK3 403 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 CPA4Q9UI42 421 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 H3BML4 177 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 M0QYG6 137 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 PEX1O43933 1283 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 UBXN7O94888 489 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 KIF20AO95235 890 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 U2AF1L5P0DN76 240 aaPredicted RBP4.22□□□□□ -1.73
VBP1-204ENST00000625964 CHRM3P20309 590 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 TKTP29401 623 aaKnown RBP4.22□□□□□ -1.73
VBP1-204ENST00000625964 FOLR3P41439 243 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 RAB1AP62820 205 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 POU6F2P78424 691 aaPredicted RBP4.22□□□□□ -1.73
VBP1-204ENST00000625964 U2AF1Q01081 240 aaKnown RBP eCLIP4.22□□□□□ -1.73
VBP1-204ENST00000625964 DYRK1AQ13627 763 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 HABP2Q14520 560 aaPredicted RBP4.22□□□□□ -1.73
VBP1-204ENST00000625964 KHDC1LQ5JSQ8 128 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 FAM102BQ5T8I3 360 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 RUSC1-AS1Q66K80 236 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 B3GNT9Q6UX72 402 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 ADGRG5Q8IZF4 528 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 CELF5Q8N6W0 485 aaKnown RBP4.22□□□□□ -1.73
VBP1-204ENST00000625964 PLBD2Q8NHP8 589 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 FBXO41Q8TF61 875 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 SNX19Q92543 992 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 LRIG1Q96JA1 1093 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 CNNM1Q9NRU3 951 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 INTS13Q9NVM9 706 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 MRPS18AQ9NVS2 196 aaKnown RBP4.22□□□□□ -1.73
VBP1-204ENST00000625964 PCDHA6Q9UN73 950 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 AGAP1Q9UPQ3 857 aa4.22□□□□□ -1.73
VBP1-204ENST00000625964 PRPF3O43395 683 aaKnown RBP4.21□□□□□ -1.73
VBP1-204ENST00000625964 CTNND1O60716 968 aaKnown RBP4.21□□□□□ -1.73
VBP1-204ENST00000625964 MOSPD3O75425 235 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 KCNJ5P48544 419 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 SOX8P57073 446 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 SF3B3Q15393 1217 aaKnown RBP4.21□□□□□ -1.73
VBP1-204ENST00000625964 KIAA0895LQ68EN5 471 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 FCRLBQ6BAA4 426 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 USP37Q86T82 979 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 VGLL2Q8N8G2 317 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 PSD4Q8NDX1 1056 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 SEMA4CQ9C0C4 833 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 SMOC2Q9H3U7 446 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 GABBR1Q9UBS5 961 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 WNT6Q9Y6F9 365 aa4.21□□□□□ -1.73
VBP1-204ENST00000625964 ZNF521Q96K83 1311 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 TSPAN6O43657 245 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 NTN1O95631 604 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 HDCP19113 662 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 GATA3P23771 443 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 NPTX2P47972 431 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 FGL2Q14314 439 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 MINDY4Q4G0A6 757 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 EMC10Q5UCC4 262 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 NXNQ6DKJ4 435 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 TAF2Q6P1X5 1199 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 MAGEB6Q8N7X4 407 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 TOR1AIP2Q8NFQ8 470 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 SLC30A5Q8TAD4 765 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 POC1BQ8TC44 478 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 DDX17Q92841 729 aaKnown RBP4.21□□□□□ -1.74
VBP1-204ENST00000625964 ETAA1Q9NY74 926 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 KLHL42Q9P2K6 505 aa4.21□□□□□ -1.74
VBP1-204ENST00000625964 AOX1Q06278 1338 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 A0A0B4J269 797 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 E7ENX8 843 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 F5H697 171 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 H3BNC9 293 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 YY2O15391 372 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 UNC5CO95185 931 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 PRR35P0CG20 571 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 PIM1P11309 404 aaPredicted RBP4.2□□□□□ -1.74
VBP1-204ENST00000625964 ITGALP20701 1170 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 NDUFV1P49821 464 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 TAP2Q03519 686 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 TUBB3Q13509 450 aa4.2□□□□□ -1.74
VBP1-204ENST00000625964 HLXQ14774 488 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms