RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CCNB1P14635 433 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 GDF10P55107 478 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 GPX6P59796 221 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 MYO1EQ12965 1108 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 KCNT1Q5JUK3 1230 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 DCAF15Q66K64 600 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 CATSPERGQ6ZRH7 1159 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 EBF2Q9HAK2 575 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 DDX56Q9NY93 547 aaKnown RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 TJP2Q9UDY2 1190 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 AGTPBP1Q9UPW5 1226 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 SHOC2Q9UQ13 582 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 COL11A1P12107 1806 aaPredicted RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 ATP2A1O14983 1001 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 FAM189A1O60320 539 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 MTM1Q13496 603 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 ANKRD22Q5VYY1 191 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 FBF1Q8TES7 1133 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 PRPF31Q8WWY3 499 aaKnown RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 L3MBTL3Q96JM7 780 aaPredicted RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 MAK16Q9BXY0 300 aaKnown RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 SMG5Q9UPR3 1016 aaKnown RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 C3orf70A6NLC5 250 aaPredicted RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 PTPN7P35236 360 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 CTCFP49711 727 aaPredicted RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 TFAMQ00059 246 aaKnown RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 OTUD4Q01804 1114 aaKnown RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 EFTUD2Q15029 972 aaKnown RBP eCLIP11.85□□□□□ -0.516e-9■■■■■ 35
VARS2-213ENST00000625423 HIF1AQ16665 826 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 TLDC1Q6P9B6 456 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 SLC35B2Q8TB61 432 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 PSMC3IPQ9P2W1 217 aaPredicted RBP11.85□□□□□ -0.51
VARS2-213ENST00000625423 CHKBQ9Y259 395 aa11.85□□□□□ -0.51
VARS2-213ENST00000625423 IGKV6D-21A0A0A0MT36 114 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 MSCO60682 206 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 UBA1P22314 1058 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 PSMA2P25787 234 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 IL1R2P27930 398 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SSTR1P30872 391 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ICAM3P32942 547 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 RFC5P40937 340 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 AP3M2P53677 418 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 TRPC3Q13507 836 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 MOGSQ13724 837 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 TFDP1Q14186 410 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SETDB1Q15047 1291 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 TARBP2Q15633 366 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 PDK4Q16654 411 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 DUOXA2Q1HG44 320 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SGSM1Q2NKQ1 1148 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 MSS51Q4VC12 460 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 VSIG1Q86XK7 387 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ACTL9Q8TC94 416 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 C12orf42Q96LP6 360 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ZNF518BQ9C0D4 1074 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 NRBP2Q9NSY0 501 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SENP1Q9P0U3 644 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 MYH9P35579 1960 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 CLUHO75153 1309 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 PARP14Q460N5 1801 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 A0A1B0GUA9 196 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SPDYE16A6NNV3 312 aaPredicted RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 TYROBPO43914 113 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 EDF1O60869 148 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 TOM1L1O75674 476 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SRGAP2CP0DJJ0 459 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 KRT4P19013 534 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 EIF4BP23588 611 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 GBP2P32456 591 aaPredicted RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 SKIV2L2P42285 1042 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 GMPSP49915 693 aaPredicted RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 TAP1Q03518 808 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 FNBP1LQ5T0N5 605 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 HHATQ5VTY9 493 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 DENND1BQ6P3S1 775 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ZPBP2Q6X784 338 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 NIPA2Q8N8Q9 360 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SLC24A2Q9UI40 661 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ZNF112Q9UJU3 913 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 CEP83Q9Y592 693 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 CST8O60676 142 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 ITGBL1O95965 494 aaPredicted RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 FGFR1P11362 822 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 TARSP26639 723 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 STAT5BP51692 787 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 SLC18A1P54219 525 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 YARSP54577 528 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 GEMIN4P57678 1058 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 PRKG1Q13976 671 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 PTPN20Q4JDL3 420 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms