RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 DRG2P55039 364 aaKnown RBP20.8■□□□□ 0.92
TREX1-205ENST00000625293 FAM193AP78312 1265 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 NKX3-2P78367 333 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 HLTFQ14527 1009 aaKnown RBP eCLIP20.8■□□□□ 0.92
TREX1-205ENST00000625293 CNGA2Q16280 664 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 KCTD19Q17RG1 926 aaPredicted RBP20.8■□□□□ 0.92
TREX1-205ENST00000625293 XKR4Q5GH76 650 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 MAP3K21Q5TCX8 1036 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 C7orf31Q8N865 590 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 NIPA2Q8N8Q9 360 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 ZBTB9Q96C00 473 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 RUNDC3BQ96NL0 473 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 MCEEQ96PE7 176 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 DEFB118Q96PH6 123 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 SH3GL2Q99962 352 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 UPF3AQ9H1J1 476 aaKnown RBP20.8■□□□□ 0.92
TREX1-205ENST00000625293 TUBGCP4Q9UGJ1 667 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 PIN4Q9Y237 131 aaKnown RBP20.8■□□□□ 0.92
TREX1-205ENST00000625293 PPEF2O14830 753 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 NDST1P52848 882 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 CYP4A22Q5TCH4 519 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 CCDC137Q6PK04 289 aaKnown RBP20.8■□□□□ 0.92
TREX1-205ENST00000625293 IQCKQ8N0W5 287 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 LRRC52Q8N7C0 313 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 PIK3R5Q8WYR1 880 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 TJP2Q9UDY2 1190 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 FAN1Q9Y2M0 1017 aa20.8■□□□□ 0.92
TREX1-205ENST00000625293 MYO1EQ12965 1108 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 KLF1Q13351 362 aaPredicted RBP20.79■□□□□ 0.92
TREX1-205ENST00000625293 LRRC38Q5VT99 294 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 BEST2Q8NFU1 509 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 EXD1Q8NHP7 514 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 RIN2Q8WYP3 895 aaPredicted RBP20.79■□□□□ 0.92
TREX1-205ENST00000625293 SLCO2A1Q92959 643 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 CPXM1Q96SM3 734 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 MTG1Q9BT17 334 aaPredicted RBP20.79■□□□□ 0.92
TREX1-205ENST00000625293 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.79■□□□□ 0.92
TREX1-205ENST00000625293 DPH5Q9H2P9 285 aa20.79■□□□□ 0.92
TREX1-205ENST00000625293 C6orf222P0C671 652 aaPredicted RBP20.78■□□□□ 0.92
TREX1-205ENST00000625293 CYP3A5P20815 502 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 GPD2P43304 727 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 GABRB2P47870 512 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 MFSD14CQ5VZR4 134 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 TAF2Q6P1X5 1199 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 MAIP1Q8WWC4 291 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 C18orf25Q96B23 403 aaPredicted RBP20.78■□□□□ 0.92
TREX1-205ENST00000625293 TSPAN18Q96SJ8 248 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 HMX1Q9NP08 348 aaPredicted RBP20.78■□□□□ 0.92
TREX1-205ENST00000625293 ZDHHC18Q9NUE0 388 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 RASAL2Q9UJF2 1139 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 KIAA1257Q9ULG3 409 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 USTQ9Y2C2 406 aa20.78■□□□□ 0.92
TREX1-205ENST00000625293 TNRC18O15417 2968 aaPredicted RBP20.78■□□□□ 0.92
TREX1-205ENST00000625293 SIGLEC16A6NMB1 481 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 PODXLO00592 558 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 RNF40O75150 1001 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 C9orf57Q5W0N0 161 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 DCUN1D2Q6PH85 259 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 XYLT1Q86Y38 959 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 ZIM3Q96PE6 472 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 TRIM6Q9C030 488 aaPredicted RBP20.77■□□□□ 0.92
TREX1-205ENST00000625293 PAK6Q9NQU5 681 aaPredicted RBP20.77■□□□□ 0.92
TREX1-205ENST00000625293 WDR35Q9P2L0 1181 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 UBQLN1Q9UMX0 589 aaKnown RBP20.77■□□□□ 0.92
TREX1-205ENST00000625293 DNAH12Q6ZR08 3092 aa20.77■□□□□ 0.92
TREX1-205ENST00000625293 F8VP50 259 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 HSF2BPO75031 334 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 ERBB2P04626 1255 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 KCNE1P15382 129 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 TCF4P15884 667 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 AKAP5P24588 427 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 PIGHQ14442 188 aaPredicted RBP20.77■□□□□ 0.91
TREX1-205ENST00000625293 SGO2Q562F6 1265 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 GLRA4Q5JXX5 417 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 LCLAT1Q6UWP7 414 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 ANKS1BQ7Z6G8 1248 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 FNIP1Q8TF40 1166 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 HEXIM2Q96MH2 286 aaKnown RBP20.77■□□□□ 0.91
TREX1-205ENST00000625293 NT5C1AQ9BXI3 368 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 GRHL1Q9NZI5 618 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 VPS18Q9P253 973 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 GTF2IRD1Q9UHL9 959 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 NME7Q9Y5B8 376 aa20.77■□□□□ 0.91
TREX1-205ENST00000625293 M0QYV0 167 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 FLT3P36888 993 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 PDCLQ13371 301 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 ZNF268Q14587 947 aaPredicted RBP20.76■□□□□ 0.91
TREX1-205ENST00000625293 GNASQ5JWF2 1037 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 ZDHHC24Q6UX98 284 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 FAM228AQ86W67 206 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 SMG8Q8ND04 991 aaKnown RBP20.76■□□□□ 0.91
TREX1-205ENST00000625293 MRPL45Q9BRJ2 306 aaKnown RBP20.76■□□□□ 0.91
TREX1-205ENST00000625293 TRIM31Q9BZY9 425 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 RNF39Q9H2S5 420 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 SCN10AQ9Y5Y9 1956 aa20.76■□□□□ 0.91
TREX1-205ENST00000625293 SMIM28A0A1B0GU29 152 aa20.75■□□□□ 0.91
TREX1-205ENST00000625293 PIRO00625 290 aa20.75■□□□□ 0.91
TREX1-205ENST00000625293 RALAP11233 206 aa20.75■□□□□ 0.91
TREX1-205ENST00000625293 RFC1P35251 1148 aaPredicted RBP20.75■□□□□ 0.91
TREX1-205ENST00000625293 GYS2P54840 703 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms