RNA–Protein interactions for RNA: ENST00000623498.3

SEM1-223, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 5 BASIC

Gene SEM1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-223ENST00000623498 TSGA10Q9BZW7 698 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 LHX5Q9H2C1 402 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 ACP6Q9NPH0 428 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 MARCH5Q9NX47 278 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 SPG21Q9NZD8 308 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
SEM1-223ENST00000623498 CXXC1Q9P0U4 656 aaPredicted RBP9.46□□□□□ -0.9
SEM1-223ENST00000623498 HMGXB4Q9UGU5 601 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 NENFQ9UMX5 172 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 RWDD3Q9Y3V2 267 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 PCDHB12Q9Y5F1 795 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 PTPRDP23468 1912 aa9.46□□□□□ -0.9
SEM1-223ENST00000623498 GBF1Q92538 1859 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 OR6C75A6NL08 312 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 ESPNB1AK53 854 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 O00370 1275 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 ZNF263O14978 683 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 PJA2O43164 708 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 KRT86O43790 486 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 TLL1O43897 1013 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 EFEMP2O95967 443 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 SETSIPP0DME0 302 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 UNGP13051 313 aaPredicted RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 PTPN1P18031 435 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 COL9A1P20849 921 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 IGFBP6P24592 240 aaPredicted RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 LMO2P25791 158 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 CDH5P33151 784 aaPredicted RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 NSFP46459 744 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 SLC8A3P57103 927 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 SNX16P57768 344 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 TSPY1Q01534 308 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 CENPCQ03188 943 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 KRT17Q04695 432 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 CLEC16AQ2KHT3 1053 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 USP41Q3LFD5 358 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 ARHGAP29Q52LW3 1261 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 INTS6LQ5JSJ4 861 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 ZNF280DQ6N043 979 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 ANKS3Q6ZW76 656 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 TMCO2Q7Z6W1 182 aaPredicted RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 GPR65Q8IYL9 337 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 DCP1BQ8IZD4 617 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 SLC39A11Q8N1S5 342 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 COLGALT1Q8NBJ5 622 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 B3GALNT2Q8NCR0 500 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 MSANTD4Q8NCY6 345 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 OLIG1Q8TAK6 271 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 SP7Q8TDD2 431 aaPredicted RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 CYFIP2Q96F07 1278 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 TRIM11Q96F44 468 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 VCPIP1Q96JH7 1222 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 CALR3Q96L12 384 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 NOX5Q96PH1 765 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 PCDHB18PQ96TA0 734 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 HNRNPABQ99729 332 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 SYT15Q9BQS2 421 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 TTPALQ9BTX7 342 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 MIS12Q9H081 205 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 HESX1Q9UBX0 185 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.45□□□□□ -0.9
SEM1-223ENST00000623498 REXO2Q9Y3B8 237 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 NME7Q9Y5B8 376 aa9.45□□□□□ -0.9
SEM1-223ENST00000623498 TIMM13Q9Y5L4 95 aaPredicted RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 MRPL42Q9Y6G3 142 aaKnown RBP9.45□□□□□ -0.9
SEM1-223ENST00000623498 ANKRD62A6NC57 917 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 BTNL10A8MVZ5 291 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 NT5C1B-RDH14C9J2C7 533 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 F8W810 466 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 MICAL2O94851 1124 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 FTLP02792 175 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 TUBB4AP04350 444 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 TMEM253P0C7T8 217 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 MYBL1P10243 752 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 TKTP29401 623 aaKnown RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 MAGEA10P43363 369 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 NOMO3P69849 1222 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 PLCB3Q01970 1234 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 SMARCB1Q12824 385 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 ORC1Q13415 861 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 MRPL58Q14197 206 aaKnown RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 NFE2Q16621 373 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 VARS2Q5ST30 1063 aaKnown RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 FAM171BQ6P995 826 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 DDX53Q86TM3 631 aaKnown RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 CEP57Q86XR8 500 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 PHF13Q86YI8 300 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 REXO1L1PQ8IX06 675 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 RNF168Q8IYW5 571 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 ANKRD52Q8NB46 1076 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 MYCBPAPQ8TBZ2 947 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 STK32AQ8WU08 396 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 CTNNBL1Q8WYA6 563 aaPredicted RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 CLP1Q92989 425 aaKnown RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 RNPC3Q96LT9 517 aaKnown RBP9.44□□□□□ -0.9
SEM1-223ENST00000623498 ZSWIM1Q9BR11 485 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 GPR62Q9BZJ7 368 aa9.44□□□□□ -0.9
SEM1-223ENST00000623498 DPEP3Q9H4B8 488 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms