RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 CYTH4Q9UIA0 394 aa13.65□□□□□ -0.22
FMR1-220ENST00000621987 DSEQ9UL01 958 aa13.65□□□□□ -0.22
FMR1-220ENST00000621987 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
FMR1-220ENST00000621987 FAM170AA1A519 330 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 ARHGEF37A1IGU5 675 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 I3L4J1 428 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 AMHP03971 560 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 GPD2P43304 727 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 OR1G1P47890 313 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 IFI16Q16666 785 aaKnown RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 PPP1R26Q5T8A7 1209 aaPredicted RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 KIAA0319Q5VV43 1072 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 C16orf59Q7L2K0 433 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 LRRC43Q8N309 656 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 LRRC57Q8N9N7 239 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 B3GALNT2Q8NCR0 500 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 TPCN2Q8NHX9 752 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 HASPINQ8TF76 798 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 ZNF592Q92610 1267 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 ZNF689Q96CS4 500 aaPredicted RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 RTP3Q9BQQ7 232 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 DDX43Q9NXZ2 648 aaKnown RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 ADAM22Q9P0K1 906 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 TSPAN16Q9UKR8 245 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 COG5Q9UP83 839 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 CEP83Q9Y592 693 aa13.64□□□□□ -0.23
FMR1-220ENST00000621987 TIMM13Q9Y5L4 95 aaPredicted RBP13.64□□□□□ -0.23
FMR1-220ENST00000621987 GRID2IPA4D2P6 1211 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 M0QYV0 167 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 NRP1O14786 923 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 CALB1P05937 261 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 ACRP10323 421 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 PTPN1P18031 435 aaKnown RBP13.63□□□□□ -0.23
FMR1-220ENST00000621987 RRM1P23921 792 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 NOP2P46087 812 aaKnown RBP13.63□□□□□ -0.23
FMR1-220ENST00000621987 SLC11A1P49279 550 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 DEFB103AP81534 67 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 PPIGQ13427 754 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■□□ 15.1
FMR1-220ENST00000621987 GOLGA7BQ2TAP0 167 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 PLEKHA7Q6IQ23 1121 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 MMS22LQ6ZRQ5 1243 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 SLFN11Q7Z7L1 901 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 TTC30AQ86WT1 665 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 METTL23Q86XA0 190 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 ALS2CR12Q96Q35 445 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 NAPGQ99747 312 aaPredicted RBP13.63□□□□□ -0.23
FMR1-220ENST00000621987 C11orf70Q9BRQ4 267 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 OSGEPQ9NPF4 335 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 FAM49BQ9NUQ9 324 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 UVRAGQ9P2Y5 699 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 CNOT8Q9UFF9 292 aaKnown RBP13.63□□□□□ -0.23
FMR1-220ENST00000621987 CDH9Q9ULB4 789 aa13.63□□□□□ -0.23
FMR1-220ENST00000621987 PRG3Q9Y2Y8 225 aaPredicted RBP13.63□□□□□ -0.23
FMR1-220ENST00000621987 PTPRSQ13332 1948 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 TCRBV5S1A1TA0A578 114 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 CTAGE9A4FU28 777 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ATMINO43313 823 aaPredicted RBP13.62□□□□□ -0.23
FMR1-220ENST00000621987 ATP2C2O75185 946 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 PALMO75781 387 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 UPP2O95045 317 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ALDH2P05091 517 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 GALTP07902 379 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 SETSIPP0DME0 302 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
FMR1-220ENST00000621987 PCSK1P29120 753 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 GABRB2P47870 512 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 NAP1L1P55209 391 aaKnown RBP13.62□□□□□ -0.23
FMR1-220ENST00000621987 PTPN20Q4JDL3 420 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 LIN9Q5TKA1 542 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ERICH1Q86X53 443 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 UBA3Q8TBC4 463 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 HNRNPABQ99729 332 aaKnown RBP13.62□□□□□ -0.23
FMR1-220ENST00000621987 SYT15Q9BQS2 421 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ACBD6Q9BR61 282 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 NUP85Q9BW27 656 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 COLEC11Q9BWP8 271 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 CWH43Q9H720 699 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 CRTAC1Q9NQ79 661 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 CTTNBP2NLQ9P2B4 639 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 ADAM28Q9UKQ2 775 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 JRKLQ9Y4A0 524 aa13.62□□□□□ -0.23
FMR1-220ENST00000621987 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
FMR1-220ENST00000621987 BUB1BO60566 1050 aaPredicted RBP13.61□□□□□ -0.23
FMR1-220ENST00000621987 TADA2AO75478 443 aa13.61□□□□□ -0.23
FMR1-220ENST00000621987 EFEMP2O95967 443 aa13.61□□□□□ -0.23
FMR1-220ENST00000621987 CCDC130P13994 396 aa13.61□□□□□ -0.23
FMR1-220ENST00000621987 TKTP29401 623 aaKnown RBP13.61□□□□□ -0.23
FMR1-220ENST00000621987 GSCP56915 257 aaPredicted RBP13.61□□□□□ -0.23
FMR1-220ENST00000621987 PSMC1P62191 440 aaKnown RBP13.61□□□□□ -0.23
FMR1-220ENST00000621987 FPGSQ05932 587 aa13.61□□□□□ -0.23
FMR1-220ENST00000621987 PDCLQ13371 301 aa13.61□□□□□ -0.23
FMR1-220ENST00000621987 CCDC142Q17RM4 750 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms