RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 F9P00740 461 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 MMEP08473 750 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 EFEMP1Q12805 493 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 KRT72Q14CN4 511 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 NLRP14Q86W24 1093 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 NUDCD3Q8IVD9 361 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 RUBCNQ92622 972 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 XPO6Q96QU8 1125 aaKnown RBP10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 MKNK1Q9BUB5 465 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 APOL5Q9BWW9 433 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 RAB6BQ9NRW1 208 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 MAP10Q9P2G4 905 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 FBXO2Q9UK22 296 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 MYMKA6NI61 221 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 P4HA2O15460 535 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 POMCP01189 267 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 KITP10721 976 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 ACVR2BQ13705 512 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 TRADDQ15628 312 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 SHC4Q6S5L8 630 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 CATSPER3Q86XQ3 398 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 ZNF513Q8N8E2 541 aaPredicted RBP10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 ELMO2Q96JJ3 720 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 OSBPL9Q96SU4 736 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 ATXN3LQ9H3M9 355 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 RSAD1Q9HA92 442 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 SCUBE2Q9NQ36 999 aa10.22□□□□□ -0.77
CLTCL1-211ENST00000621271 A0A087WZ62 844 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 TTC26A0AVF1 554 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 FAM205CA6NFA0 338 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 SPTLC1O15269 473 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 H2AFYO75367 372 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 PPIL2Q13356 520 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 PCNX4Q63HM2 1172 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 ERAP2Q6P179 960 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 ATL2Q8NHH9 583 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 ARHGEF26Q96DR7 871 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 ELAC2Q9BQ52 826 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 FDXACB1Q9BRP7 624 aaPredicted RBP10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 FAM187AA6NFU0 413 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 INSRRP14616 1297 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 FXR2P51116 673 aaKnown RBP eCLIP10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 PLCL1Q15111 1095 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 CXorf38Q8TB03 319 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 CPB2Q96IY4 423 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 ATP6V1G3Q96LB4 118 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 EVA1BQ9NVM1 165 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 THEGQ9P2T0 379 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 KIAA1257Q9ULG3 409 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 NCKAP1Q9Y2A7 1128 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 PCDHB5Q9Y5E4 795 aa10.21□□□□□ -0.77
CLTCL1-211ENST00000621271 C2orf81A6NN90 581 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 MZF1P28698 734 aaPredicted RBP10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 USP10Q14694 798 aaKnown RBP10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 FAM171A1Q5VUB5 890 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 NAPEPLDQ6IQ20 393 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF677Q86XU0 584 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 ATP8B4Q8TF62 1192 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 NRBF2Q96F24 287 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 TMEM117Q9H0C3 514 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 CNTNAP5Q8WYK1 1306 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 RHOBTB3O94955 611 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 RHOCP08134 193 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 IL1R1P14778 569 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 BRD2P25440 801 aaKnown RBP10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 PSEN2P49810 448 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 SGCGQ13326 291 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 PTK6Q13882 451 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 MTF1Q14872 753 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 IQSEC1Q6DN90 963 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 OVOS1Q6IE37 1185 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 POTEAQ6S8J7 498 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 NAF1Q96HR8 494 aaKnown RBP10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 TSEN34Q9BSV6 310 aaKnown RBP10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 UBXN6Q9BZV1 441 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 NSMCE4AQ9NXX6 385 aa10.21□□□□□ -0.78
CLTCL1-211ENST00000621271 LRRIQ3A6PVS8 624 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 NFIBO00712 420 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 DCTN3O75935 186 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ANXA9O76027 345 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 OAZ1P54368 228 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 LRRC74AQ0VAA2 488 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 SEZ6Q53EL9 994 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 C11orf96Q7Z7L8 435 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 ACOT1Q86TX2 421 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 KIRREL3Q8IZU9 778 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 RTFDC1Q9BY42 306 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 DDX47Q9H0S4 455 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 TLR8Q9NR97 1041 aaKnown RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 FBXL5Q9UKA1 691 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 PMS2P54278 862 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 RHOAP61586 193 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 PPP2R2AP63151 447 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 LY6KQ17RY6 165 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 SYTL5Q8TDW5 730 aaPredicted RBP10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 OTULINQ96BN8 352 aa10.2□□□□□ -0.78
CLTCL1-211ENST00000621271 PI4K2AQ9BTU6 479 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms