RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 AFPP02771 609 aaKnown RBP19.52■□□□□ 0.72
LITAF-220ENST00000620789 ALDH1A3P47895 512 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 TUFMP49411 452 aaKnown RBP19.52■□□□□ 0.72
LITAF-220ENST00000620789 KCNH2Q12809 1159 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 MAPRE1Q15691 268 aaKnown RBP19.52■□□□□ 0.72
LITAF-220ENST00000620789 WDR44Q5JSH3 913 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 ELMOD1Q8N336 334 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 SEPT5Q99719 369 aaPredicted RBP19.52■□□□□ 0.72
LITAF-220ENST00000620789 CYP3A43Q9HB55 503 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 ABCB6Q9NP58 842 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 CRTAC1Q9NQ79 661 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 HCFC1R1Q9NWW0 138 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 DNMT3BQ9UBC3 853 aaKnown RBP19.52■□□□□ 0.72
LITAF-220ENST00000620789 NR2E1Q9Y466 385 aa19.52■□□□□ 0.72
LITAF-220ENST00000620789 LOC730098B7Z3J9 87 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 SOAT2O75908 522 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 HAPLN1P10915 354 aaPredicted RBP19.51■□□□□ 0.71
LITAF-220ENST00000620789 CETN1Q12798 172 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 MGAT5BQ3V5L5 792 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 CFAP221Q4G0U5 840 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 C4orf50Q6ZRC1 276 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 C11orf57Q6ZUT1 292 aaPredicted RBP19.51■□□□□ 0.71
LITAF-220ENST00000620789 CREBRFQ8IUR6 639 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 SPATA2LQ8IUW3 424 aaPredicted RBP19.51■□□□□ 0.71
LITAF-220ENST00000620789 FAM114A1Q8IWE2 563 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 GJD3Q8N144 294 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 MYCBPAPQ8TBZ2 947 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 ENOX1Q8TC92 643 aaKnown RBP19.51■□□□□ 0.71
LITAF-220ENST00000620789 FUBP3Q96I24 572 aaKnown RBP eCLIP19.51■□□□□ 0.71
LITAF-220ENST00000620789 DPEP3Q9H4B8 488 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 CEP72Q9P209 647 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 USTQ9Y2C2 406 aa19.51■□□□□ 0.71
LITAF-220ENST00000620789 PTPN2P17706 415 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 PTPN1P18031 435 aaKnown RBP19.5■□□□□ 0.71
LITAF-220ENST00000620789 SP100P23497 879 aaPredicted RBP19.5■□□□□ 0.71
LITAF-220ENST00000620789 SSTR3P32745 418 aaPredicted RBP19.5■□□□□ 0.71
LITAF-220ENST00000620789 EPHB3P54753 998 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 NTHL1P78549 312 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 TYRO3Q06418 890 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 INCA1Q0VD86 236 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 PABPC1LQ4VXU2 614 aaKnown RBP19.5■□□□□ 0.71
LITAF-220ENST00000620789 MDH1BQ5I0G3 518 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 IQCEQ6IPM2 695 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 UNC93AQ86WB7 457 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 B3GALNT2Q8NCR0 500 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 MYLPFQ96A32 169 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 TNIP3Q96KP6 325 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 ZNF512Q96ME7 567 aaPredicted RBP19.5■□□□□ 0.71
LITAF-220ENST00000620789 DNAJC25Q9H1X3 360 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 CD320Q9NPF0 282 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 NFE2L3Q9Y4A8 694 aa19.5■□□□□ 0.71
LITAF-220ENST00000620789 MUC3AQ02505 3323 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 C2CD4DB7Z1M9 353 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 RHOP08100 348 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 ATF6P18850 670 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 FSHRP23945 695 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 CYP2F1P24903 491 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 MTIF2P46199 727 aaKnown RBP19.49■□□□□ 0.71
LITAF-220ENST00000620789 NDST1P52848 882 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 OTOP3Q7RTS5 596 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 TDRD5Q8NAT2 981 aaKnown RBP19.49■□□□□ 0.71
LITAF-220ENST00000620789 TATDN2Q93075 761 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 PCED1BQ96HM7 432 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 LPIN3Q9BQK8 851 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 CORO1BQ9BR76 489 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 AVENQ9NQS1 362 aaPredicted RBP19.49■□□□□ 0.71
LITAF-220ENST00000620789 SAMSN1Q9NSI8 373 aaKnown RBP19.49■□□□□ 0.71
LITAF-220ENST00000620789 MAGEC2Q9UBF1 373 aaPredicted RBP19.49■□□□□ 0.71
LITAF-220ENST00000620789 HMGXB4Q9UGU5 601 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 ASB3Q9Y575 518 aa19.49■□□□□ 0.71
LITAF-220ENST00000620789 LETM1O95202 739 aaPredicted RBP19.48■□□□□ 0.71
LITAF-220ENST00000620789 CD58P19256 250 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 MAGEA11P43364 429 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 CYP27A1Q02318 531 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 VEPH1Q14D04 833 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 SKOR2Q2VWA4 1001 aaPredicted RBP19.48■□□□□ 0.71
LITAF-220ENST00000620789 HSP90AA4PQ58FG1 418 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 GET4Q7L5D6 327 aaPredicted RBP19.48■□□□□ 0.71
LITAF-220ENST00000620789 ITIH5Q86UX2 942 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 TTC39CQ8N584 583 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 LMO3Q8TAP4 145 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 PSMG2Q969U7 264 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 ACSF2Q96CM8 615 aaPredicted RBP19.48■□□□□ 0.71
LITAF-220ENST00000620789 ARID3AQ99856 593 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 FAM124BQ9H5Z6 455 aaPredicted RBP19.48■□□□□ 0.71
LITAF-220ENST00000620789 NCOR1O75376 2440 aa19.48■□□□□ 0.71
LITAF-220ENST00000620789 DOCK6Q96HP0 2047 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 CILPO75339 1184 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 EPHA5P54756 1037 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 RPL10AP62906 217 aaKnown RBP19.47■□□□□ 0.71
LITAF-220ENST00000620789 LRMPQ12912 555 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 ORC1Q13415 861 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 CUL2Q13617 745 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 MAN2A1Q16706 1144 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 VSTM1Q6UX27 236 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 ACOT1Q86TX2 421 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 CRYBG2Q8N1P7 616 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 LEMD2Q8NC56 503 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 EHBP1Q8NDI1 1231 aa19.47■□□□□ 0.71
LITAF-220ENST00000620789 FAM200AQ8TCP9 573 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms