RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 FAXDC2Q96IV6 333 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 RIPOR3Q96MK2 946 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 KREMEN1Q96MU8 473 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 NT5C1BQ96P26 610 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 SMYD3Q9H7B4 428 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 SFXN1Q9H9B4 322 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 GDAP2Q9NXN4 497 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 FNIP2Q9P278 1114 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 MUTYHQ9UIF7 546 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 CD207Q9UJ71 328 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 AGAP1Q9UPQ3 857 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 ACACBO00763 2458 aa7.56□□□□□ -1.2
PSMB3-212ENST00000620309 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
PSMB3-212ENST00000620309 H3BQ06 376 aaPredicted RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 RNF225M0QZC1 329 aaPredicted RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 P4HA1P13674 534 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ACO1P21399 889 aaKnown RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 TBXAS1P24557 533 aaPredicted RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 DNAJB1P25685 340 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ELF1P32519 619 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 LTBRP36941 435 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ZNF132P52740 706 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 LILRA4P59901 499 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ERVFC1P60507 584 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ITIH3Q06033 890 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 HYAL1Q12794 435 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SMAD4Q13485 552 aaKnown RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 TRPC3Q13507 836 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SMAD2Q15796 467 aaKnown RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SGSM1Q2NKQ1 1148 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ZNF667Q5HYK9 610 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SMYD5Q6GMV2 418 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 LLGL2Q6P1M3 1020 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SCARA5Q6ZMJ2 495 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 TRIM67Q6ZTA4 783 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 CCDC149Q6ZUS6 474 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ASCL5Q7RTU5 278 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 THEM5Q8N1Q8 247 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 ELMOD1Q8N336 334 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 PPM1KQ8N3J5 372 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 NEK11Q8NG66 645 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 OLIG1Q8TAK6 271 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 HDAC7Q8WUI4 952 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 KBTBD7Q8WVZ9 684 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 PIK3R5Q8WYR1 880 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SHC3Q92529 594 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 JAKMIP2Q96AA8 810 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 NECTIN4Q96NY8 510 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 DNAJC7Q99615 494 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 VN1R3Q9BXE9 311 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 EDEM3Q9BZQ6 932 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 SDCBP2Q9H190 292 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 PLEKHA4Q9H4M7 779 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 FAM124BQ9H5Z6 455 aaPredicted RBP7.55□□□□□ -1.2
PSMB3-212ENST00000620309 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.55□□□□□ -1.27e-11■■■■■ 260.8
PSMB3-212ENST00000620309 FAM86C1Q9NVL1 165 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 HMGXB4Q9UGU5 601 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 MYO6Q9UM54 1294 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 PCDHB8Q9UN66 801 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 POLIQ9UNA4 740 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 HCFC2Q9Y5Z7 792 aa7.55□□□□□ -1.2
PSMB3-212ENST00000620309 FRYLO94915 3013 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 ANAPC1Q9H1A4 1944 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 TMEM221A6NGB7 291 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 LRRC53A6NM62 1247 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 HIDE1A8MVS5 230 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 KPNA7A9QM74 516 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 M0QZQ0 153 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 M0R296 226 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 PER2O15055 1255 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 HUS1O60921 280 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CLASP2O75122 1294 aaKnown RBP7.54□□□□□ -1.2
PSMB3-212ENST00000620309 KRT37O76014 449 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 PNMA6AP0CW24 399 aaPredicted RBP7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CPB1P15086 417 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 FGFR3P22607 806 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 FECHP22830 423 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CASP14P31944 242 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 MTHFRP42898 656 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 RAP1GAPP47736 663 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CLCN4P51793 760 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 POLR2FP61218 127 aaKnown RBP7.54□□□□□ -1.2
PSMB3-212ENST00000620309 TNNC1P63316 161 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 LRMPQ12912 555 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 PLD1Q13393 1074 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 SOWAHAQ2M3V2 549 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CTC1Q2NKJ3 1217 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 WDR72Q3MJ13 1102 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CTXN3Q4LDR2 81 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 WDR44Q5JSH3 913 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 CYP26C1Q6V0L0 522 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 RTL10Q7L3V2 364 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 RRAGAQ7L523 313 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 ENOSF1Q7L5Y1 443 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 ADGRD2Q7Z7M1 963 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 RNF135Q8IUD6 432 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 GLYCTKQ8IVS8 523 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 TOP6BLQ8N6T0 577 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 TC2NQ8N9U0 490 aa7.54□□□□□ -1.2
PSMB3-212ENST00000620309 SPATA18Q8TC71 538 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms