RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 ROR1Q01973 937 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 BAATQ14032 418 aaPredicted RBP11.49□□□□□ -0.57
HNF4A-209ENST00000619550 OR6B2Q6IFH4 312 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 MARK2Q7KZI7 788 aaKnown RBP11.49□□□□□ -0.57
HNF4A-209ENST00000619550 RAB44Q7Z6P3 723 aaPredicted RBP11.49□□□□□ -0.57
HNF4A-209ENST00000619550 RAET1EQ8TD07 263 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 SCG3Q8WXD2 468 aaKnown RBP11.49□□□□□ -0.57
HNF4A-209ENST00000619550 KLF6Q99612 283 aaPredicted RBP11.49□□□□□ -0.57
HNF4A-209ENST00000619550 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 UBAP1Q9NZ09 502 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 FIS1Q9Y3D6 152 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 IFT172Q9UG01 1749 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 FGFR2P21802 821 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 MORF4L2Q15014 288 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 ARL13BQ3SXY8 428 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.49□□□□□ -0.574e-7■□□□□ 9.2
HNF4A-209ENST00000619550 RDM1Q8NG50 284 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 TMEM117Q9H0C3 514 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 ASNSD1Q9NWL6 643 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 HUS1O60921 280 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 EPHB2P29323 1055 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 OSTNP61366 133 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 CNGA2Q16280 664 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 HORMAD1Q86X24 394 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 URGCPQ8TCY9 931 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 ATP8B4Q8TF62 1192 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 EME1Q96AY2 570 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 BTBD10Q9BSF8 475 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 GIMAP4Q9NUV9 329 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 MRGBPQ9NV56 204 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 UBE4BO95155 1302 aa11.49□□□□□ -0.57
HNF4A-209ENST00000619550 C16orf96A6NNT2 1141 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 PI4K2BG5E9Z4 385 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 SNRPAP09012 282 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 KBTBD12Q3ZCT8 623 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 NT5DC3Q86UY8 548 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 ARID3BQ8IVW6 561 aaPredicted RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 USP33Q8TEY7 942 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 SCFD2Q8WU76 684 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 CKAP2Q8WWK9 683 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 MYLK2Q9H1R3 596 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 R3HDM2Q9Y2K5 976 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 SH3BP1Q9Y3L3 701 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 SLC16A4O15374 487 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 NUDT17P0C025 328 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 NFKBIAP25963 317 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 ATICP31939 592 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 EIF2B2P49770 351 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 DEFA1P59665 94 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 DEFA3P59666 94 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 OCRLQ01968 901 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 MTFR1Q15390 333 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 C16orf89Q6UX73 402 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 GPRC5AQ8NFJ5 357 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 HEXIM2Q96MH2 286 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 MTIF3Q9H2K0 278 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 TYK2P29597 1187 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 RPL21P46778 160 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 SERPINB9P50453 376 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 HUNKP57058 714 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 RAB15P59190 212 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 C11orf63Q6NUN7 778 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 ERO1BQ86YB8 467 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 TMCO5AQ8N6Q1 288 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 TMEM237Q96Q45 408 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 ZBED2Q9BTP6 218 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 HSD3B7Q9H2F3 369 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 NWD1Q149M9 1564 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 FAM205AQ6ZU69 1335 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 UBR1Q8IWV7 1749 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 ZBBXA8MT70 800 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 TNFAIP8O95379 198 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 GH1P01241 217 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 KRT16P08779 473 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 COPAP53621 1224 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 MAPRE2Q15555 327 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 PARP6Q2NL67 630 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 RNF43Q68DV7 783 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 RBM12BQ8IXT5 1001 aaKnown RBP11.48□□□□□ -0.57
HNF4A-209ENST00000619550 STKLD1Q8NE28 680 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 OR6B3Q8NGW1 331 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 KLHL25Q9H0H3 589 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 SLC24A2Q9UI40 661 aa11.48□□□□□ -0.57
HNF4A-209ENST00000619550 TBKBP1A7MCY6 615 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
HNF4A-209ENST00000619550 RALAP11233 206 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 IL1R1P14778 569 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 CYP11B2P19099 503 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 EFTUD2Q15029 972 aaKnown RBP eCLIP11.47□□□□□ -0.573e-7■■■□□ 15.9
HNF4A-209ENST00000619550 QPCTQ16769 361 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 HAUS6Q7Z4H7 955 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 MCUQ8NE86 351 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 SENP7Q9BQF6 1050 aa11.47□□□□□ -0.57
HNF4A-209ENST00000619550 POLR3CQ9BUI4 534 aaPredicted RBP11.47□□□□□ -0.57
HNF4A-209ENST00000619550 GPBP1L1Q9HC44 474 aaPredicted RBP11.47□□□□□ -0.57
HNF4A-209ENST00000619550 TIMMDC1Q9NPL8 285 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms