RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 FGGP02679 453 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 FAM153BP0C7A2 387 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 VDRP11473 427 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 TAF6P49848 677 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 AFF1P51825 1210 aaKnown RBP13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 SOWAHAQ2M3V2 549 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 FAM153CQ494X1 144 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 PLEKHA7Q6IQ23 1121 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 DNAJC24Q6P3W2 148 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 UBA3Q8TBC4 463 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 CASKIN2Q8WXE0 1202 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 WNT8AQ9H1J5 351 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 FAM49BQ9NUQ9 324 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 TJP2Q9UDY2 1190 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 FAM153AQ9UHL3 310 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 PHF24Q9UPV7 400 aa13.45□□□□□ -0.26
TNFAIP3-209ENST00000619035 A8MXQ7 604 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 KBTBD13C9JR72 458 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 GOLGA8SH3BPF8 625 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 O00370 1275 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 HCRTO43612 131 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 CDH5P33151 784 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 SSR1P43307 286 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 LLGL1Q15334 1064 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 TRIM71Q2Q1W2 868 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 PTPN20Q4JDL3 420 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 RASGEF1CQ8N431 466 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 MCEEQ96PE7 176 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 PPP1R10Q96QC0 940 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 CARD9Q9H257 536 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 USTQ9Y2C2 406 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 PDGFRBP09619 1106 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 CKBP12277 381 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 CTNNA1P35221 906 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 PNPLA4P41247 253 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 RAB27AP51159 221 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 RPL7AP62424 266 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 GABPB1Q06547 395 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 SV2CQ496J9 727 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 DCUN1D2Q6PH85 259 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 DDX42Q86XP3 938 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 TSEN2Q8NCE0 465 aaKnown RBP13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 FEZF2Q8TBJ5 459 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 CD101Q93033 1021 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 ADAM2Q99965 735 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 LHX5Q9H2C1 402 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 GDF3Q9NR23 364 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 AMACRQ9UHK6 382 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 TSPAN16Q9UKR8 245 aa13.44□□□□□ -0.26
TNFAIP3-209ENST00000619035 CCDC66A2RUB6 948 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 ARL5CA6NH57 179 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 SART1O43290 800 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 ZNF623O75123 536 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 THP07101 528 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 SKIP12755 728 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 GJC1P36383 396 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 SCNN1GP51170 649 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 CNGA2Q16280 664 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 GOLGA7BQ2TAP0 167 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 GLE1Q53GS7 698 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 AGMOQ6ZNB7 445 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 APPL2Q8NEU8 664 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 CPXM1Q96SM3 734 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 UNC93B1Q9H1C4 597 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 DPEP3Q9H4B8 488 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 VPS18Q9P253 973 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 KIAA1257Q9ULG3 409 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 FAN1Q9Y2M0 1017 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 NME7Q9Y5B8 376 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PIK3R2O00459 728 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 HUS1O60921 280 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PROSCO94903 275 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PEX5P50542 639 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 LILRA4P59901 499 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PSMC1P62191 440 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PPP1R26Q5T8A7 1209 aaPredicted RBP13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 SEL1L2Q5TEA6 688 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 MRPL10Q7Z7H8 261 aaKnown RBP13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 GSTCDQ8NEC7 633 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 SNX25Q9H3E2 840 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 SLC38A7Q9NVC3 462 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 MIOSQ9NXC5 875 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 STRIP2Q9ULQ0 834 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PTPN22Q9Y2R2 807 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 PCDHA3Q9Y5H8 950 aa13.43□□□□□ -0.26
TNFAIP3-209ENST00000619035 DNM1LO00429 736 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 SYF2O95926 243 aaKnown RBP13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 PYGMP11217 842 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 FGFR1P11362 822 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 CTNNA2P26232 953 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 GGCXP38435 758 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 SLC1A1P43005 524 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 RWDD2BP57060 319 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 PDCLQ13371 301 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 IFT20Q8IY31 132 aa13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.42□□□□□ -0.26
TNFAIP3-209ENST00000619035 KBTBD7Q8WVZ9 684 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms