RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 FGF13Q92913 245 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PSMG2Q969U7 264 aa8.83□□□□□ -1
NEK3-209ENST00000618856 NXPE3Q969Y0 559 aa8.83□□□□□ -1
NEK3-209ENST00000618856 ACSF2Q96CM8 615 aaPredicted RBP8.83□□□□□ -1
NEK3-209ENST00000618856 PGLYRP2Q96PD5 576 aa8.83□□□□□ -1
NEK3-209ENST00000618856 SDCBP2Q9H190 292 aa8.83□□□□□ -1
NEK3-209ENST00000618856 EPHX3Q9H6B9 360 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PIDD1Q9HB75 910 aa8.83□□□□□ -1
NEK3-209ENST00000618856 APOBEC3GQ9HC16 384 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 METTL14Q9HCE5 456 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 C11orf16Q9NQ32 467 aa8.83□□□□□ -1
NEK3-209ENST00000618856 IGSF9Q9P2J2 1179 aa8.83□□□□□ -1
NEK3-209ENST00000618856 ARMCX3Q9UH62 379 aaPredicted RBP8.83□□□□□ -1
NEK3-209ENST00000618856 GTF3C4Q9UKN8 822 aa8.83□□□□□ -1
NEK3-209ENST00000618856 CDH7Q9ULB5 785 aa8.83□□□□□ -1
NEK3-209ENST00000618856 POLIQ9UNA4 740 aa8.83□□□□□ -1
NEK3-209ENST00000618856 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
NEK3-209ENST00000618856 R3HCC1Q9Y3T6 440 aaKnown RBP8.83□□□□□ -1
NEK3-209ENST00000618856 PCDHB5Q9Y5E4 795 aa8.83□□□□□ -1
NEK3-209ENST00000618856 PTPRDP23468 1912 aa8.82□□□□□ -1
NEK3-209ENST00000618856 DOCK6Q96HP0 2047 aa8.82□□□□□ -1
NEK3-209ENST00000618856 SPDYE4A6NLX3 237 aa8.82□□□□□ -1
NEK3-209ENST00000618856 GPR37L1O60883 481 aa8.82□□□□□ -1
NEK3-209ENST00000618856 PHACTR2O75167 634 aa8.82□□□□□ -1
NEK3-209ENST00000618856 ATP2C2O75185 946 aa8.82□□□□□ -1
NEK3-209ENST00000618856 NOL4O94818 638 aa8.82□□□□□ -1
NEK3-209ENST00000618856 GNA14O95837 355 aa8.82□□□□□ -1
NEK3-209ENST00000618856 HMGA1P17096 107 aaKnown RBP8.82□□□□□ -1
NEK3-209ENST00000618856 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
NEK3-209ENST00000618856 WEE1P30291 646 aa8.82□□□□□ -1
NEK3-209ENST00000618856 TNNC1P63316 161 aa8.82□□□□□ -1
NEK3-209ENST00000618856 HTR4Q13639 388 aa8.82□□□□□ -1
NEK3-209ENST00000618856 MAPRE1Q15691 268 aaKnown RBP8.82□□□□□ -1
NEK3-209ENST00000618856 CCDC142Q17RM4 750 aa8.82□□□□□ -1
NEK3-209ENST00000618856 ZNF667Q5HYK9 610 aa8.82□□□□□ -1
NEK3-209ENST00000618856 VSTM1Q6UX27 236 aa8.82□□□□□ -1
NEK3-209ENST00000618856 DNAJB7Q7Z6W7 309 aaPredicted RBP8.82□□□□□ -1
NEK3-209ENST00000618856 UNC93AQ86WB7 457 aa8.82□□□□□ -1
NEK3-209ENST00000618856 IRF2BP1Q8IU81 584 aa8.82□□□□□ -1
NEK3-209ENST00000618856 NPAS3Q8IXF0 933 aa8.82□□□□□ -1
NEK3-209ENST00000618856 CRYBG2Q8N1P7 616 aa8.82□□□□□ -1
NEK3-209ENST00000618856 FBXL13Q8NEE6 735 aa8.82□□□□□ -1
NEK3-209ENST00000618856 LMO3Q8TAP4 145 aa8.82□□□□□ -1
NEK3-209ENST00000618856 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
NEK3-209ENST00000618856 PCED1BQ96HM7 432 aa8.82□□□□□ -1
NEK3-209ENST00000618856 MYRFLQ96LU7 910 aa8.82□□□□□ -1
NEK3-209ENST00000618856 SYT15Q9BQS2 421 aa8.82□□□□□ -1
NEK3-209ENST00000618856 NUP62CLQ9H1M0 184 aa8.82□□□□□ -1
NEK3-209ENST00000618856 SMYD3Q9H7B4 428 aa8.82□□□□□ -1
NEK3-209ENST00000618856 KCNK12Q9HB15 430 aa8.82□□□□□ -1
NEK3-209ENST00000618856 CYP3A43Q9HB55 503 aa8.82□□□□□ -1
NEK3-209ENST00000618856 TRPV4Q9HBA0 871 aa8.82□□□□□ -1
NEK3-209ENST00000618856 IL21Q9HBE4 155 aa8.82□□□□□ -1
NEK3-209ENST00000618856 RAB20Q9NX57 234 aa8.82□□□□□ -1
NEK3-209ENST00000618856 GDE1Q9NZC3 331 aa8.82□□□□□ -1
NEK3-209ENST00000618856 MUTYHQ9UIF7 546 aa8.82□□□□□ -1
NEK3-209ENST00000618856 CTNND2Q9UQB3 1225 aa8.82□□□□□ -1
NEK3-209ENST00000618856 SOBPA7XYQ1 873 aa8.81□□□□□ -1
NEK3-209ENST00000618856 ZNF197O14709 1029 aa8.81□□□□□ -1
NEK3-209ENST00000618856 P4HA2O15460 535 aa8.81□□□□□ -1
NEK3-209ENST00000618856 SOAT2O75908 522 aa8.81□□□□□ -1
NEK3-209ENST00000618856 P4HA1P13674 534 aa8.81□□□□□ -1
NEK3-209ENST00000618856 PTPN1P18031 435 aaKnown RBP8.81□□□□□ -1
NEK3-209ENST00000618856 FCARP24071 287 aa8.81□□□□□ -1
NEK3-209ENST00000618856 CYP2F1P24903 491 aa8.81□□□□□ -1
NEK3-209ENST00000618856 ALDH1A3P47895 512 aa8.81□□□□□ -1
NEK3-209ENST00000618856 FMO5P49326 533 aa8.81□□□□□ -1
NEK3-209ENST00000618856 MXI1P50539 228 aa8.81□□□□□ -1
NEK3-209ENST00000618856 EPHB3P54753 998 aa8.81□□□□□ -1
NEK3-209ENST00000618856 CDH8P55286 799 aa8.81□□□□□ -1
NEK3-209ENST00000618856 NLRP12P59046 1061 aa8.81□□□□□ -1
NEK3-209ENST00000618856 NOP14P78316 857 aaKnown RBP8.81□□□□□ -1
NEK3-209ENST00000618856 ZXDAP98168 799 aa8.81□□□□□ -1
NEK3-209ENST00000618856 DPCR1Q3MIW9 517 aa8.81□□□□□ -1
NEK3-209ENST00000618856 SPOPLQ6IQ16 392 aa8.81□□□□□ -1
NEK3-209ENST00000618856 KLHL10Q6JEL2 608 aa8.81□□□□□ -1
NEK3-209ENST00000618856 PAQR9Q6ZVX9 377 aa8.81□□□□□ -1
NEK3-209ENST00000618856 GAREM2Q75VX8 874 aa8.81□□□□□ -1
NEK3-209ENST00000618856 TMEM150AQ86TG1 271 aa8.81□□□□□ -1
NEK3-209ENST00000618856 UBALD2Q8IYN6 164 aa8.81□□□□□ -1
NEK3-209ENST00000618856 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
NEK3-209ENST00000618856 UBR7Q8N806 425 aa8.81□□□□□ -1
NEK3-209ENST00000618856 B3GALNT2Q8NCR0 500 aa8.81□□□□□ -1
NEK3-209ENST00000618856 SHKBP1Q8TBC3 707 aa8.81□□□□□ -1
NEK3-209ENST00000618856 WHAMMQ8TF30 809 aa8.81□□□□□ -1
NEK3-209ENST00000618856 MYLPFQ96A32 169 aa8.81□□□□□ -1
NEK3-209ENST00000618856 TCEAL4Q96EI5 215 aa8.81□□□□□ -1
NEK3-209ENST00000618856 ASIC4Q96FT7 647 aa8.81□□□□□ -1
NEK3-209ENST00000618856 TRMT2BQ96GJ1 504 aaKnown RBP8.81□□□□□ -1
NEK3-209ENST00000618856 SPATA17Q96L03 361 aa8.81□□□□□ -1
NEK3-209ENST00000618856 ZNF512Q96ME7 567 aaPredicted RBP8.81□□□□□ -1
NEK3-209ENST00000618856 MMS19Q96T76 1030 aa8.81□□□□□ -1
NEK3-209ENST00000618856 CORO1BQ9BR76 489 aa8.81□□□□□ -1
NEK3-209ENST00000618856 NIF3L1Q9GZT8 377 aa8.81□□□□□ -1
NEK3-209ENST00000618856 SNX25Q9H3E2 840 aa8.81□□□□□ -1
NEK3-209ENST00000618856 DPEP3Q9H4B8 488 aa8.81□□□□□ -1
NEK3-209ENST00000618856 ZNF334Q9HCZ1 680 aaPredicted RBP8.81□□□□□ -1
NEK3-209ENST00000618856 TMEM30AQ9NV96 361 aa8.81□□□□□ -1
NEK3-209ENST00000618856 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
NEK3-209ENST00000618856 LIMD1Q9UGP4 676 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms