RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 CD6P30203 668 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 ZNF135P52742 658 aaPredicted RBP3.88□□□□□ -1.79
TARDBP-220ENST00000618606 GNAI1P63096 354 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 ZNF618Q5T7W0 954 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 SYDE2Q5VT97 1194 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 PRAMEF17Q5VTA0 474 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 SLC18B1Q6NT16 456 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 WDR53Q7Z5U6 358 aaPredicted RBP3.88□□□□□ -1.79
TARDBP-220ENST00000618606 DLL3Q9NYJ7 618 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 SH3BP4Q9P0V3 963 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 RAD54BQ9Y620 910 aa3.88□□□□□ -1.79
TARDBP-220ENST00000618606 H0YIZ8 118 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 PPM1DO15297 605 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 VPS4BO75351 444 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 KIF20AO95235 890 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 TOP3BO95985 862 aaKnown RBP3.87□□□□□ -1.79
TARDBP-220ENST00000618606 CYP2D6P10635 497 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 RARBP10826 455 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 SFPQP23246 707 aaKnown RBP eCLIP3.87□□□□□ -1.79
TARDBP-220ENST00000618606 SMARCA1P28370 1054 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 GCLCP48506 637 aaPredicted RBP3.87□□□□□ -1.79
TARDBP-220ENST00000618606 ADKP55263 362 aaKnown RBP3.87□□□□□ -1.79
TARDBP-220ENST00000618606 BOP1Q14137 746 aaKnown RBP3.87□□□□□ -1.79
TARDBP-220ENST00000618606 PCBP2Q15366 365 aaKnown RBP eCLIP3.87□□□□□ -1.79
TARDBP-220ENST00000618606 SUPT20HL1Q3ZLR7 823 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 TEDDM1Q5T9Z0 273 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 SLC29A4Q7RTT9 530 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 USP37Q86T82 979 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 ZDHHC17Q8IUH5 632 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 FANCBQ8NB91 859 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 C3orf20Q8ND61 904 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 SH2D3AQ9BRG2 576 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 C1orf43Q9BWL3 253 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 ELOVL5Q9NYP7 299 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 ZDHHC8Q9ULC8 765 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 POLHQ9Y253 713 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 MRFAP1Q9Y605 127 aa3.87□□□□□ -1.79
TARDBP-220ENST00000618606 SHTN1A0MZ66 631 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 GABRDO14764 452 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 SLC16A3O15427 465 aaKnown RBP3.86□□□□□ -1.79
TARDBP-220ENST00000618606 XPOTO43592 962 aaKnown RBP3.86□□□□□ -1.79
TARDBP-220ENST00000618606 ARIH2O95376 493 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 PDHA1P08559 390 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 MYBL2P10244 700 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 CCKARP32238 428 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 NR4A2P43354 598 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 PIK3CGP48736 1102 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 EGFLAMQ63HQ2 1017 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 SFRP4Q6FHJ7 346 aaPredicted RBP3.86□□□□□ -1.79
TARDBP-220ENST00000618606 CATSPERGQ6ZRH7 1159 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 MAVSQ7Z434 540 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 ZNF804AQ7Z570 1209 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 DDX17Q92841 729 aaKnown RBP3.86□□□□□ -1.79
TARDBP-220ENST00000618606 HMCESQ96FZ2 354 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 TMEM79Q9BSE2 394 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 TINAGL1Q9GZM7 467 aaPredicted RBP3.86□□□□□ -1.79
TARDBP-220ENST00000618606 TRHDEQ9UKU6 1024 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 SH2B3Q9UQQ2 575 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 ATP8A1Q9Y2Q0 1164 aa3.86□□□□□ -1.79
TARDBP-220ENST00000618606 CYP2D7A0A087X1C5 515 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 LRRC14BA6NHZ5 514 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 TLR5O60602 858 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 DNAJB5O75953 348 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 CHRM3P20309 590 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 CYP2C18P33260 490 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 LIPAP38571 399 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 PHKA1P46020 1223 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 EEFSECP57772 596 aaKnown RBP3.85□□□□□ -1.79
TARDBP-220ENST00000618606 HOXA4Q00056 320 aaPredicted RBP3.85□□□□□ -1.79
TARDBP-220ENST00000618606 ODF1Q14990 250 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 DAZAP2Q15038 168 aaPredicted RBP3.85□□□□□ -1.79
TARDBP-220ENST00000618606 UAP1L1Q3KQV9 507 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 MIDNQ504T8 468 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 ICE2Q659A1 982 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 KRT73Q86Y46 540 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.85□□□□□ -1.79
TARDBP-220ENST00000618606 PRSS22Q9GZN4 317 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 MRPL46Q9H2W6 279 aaKnown RBP3.85□□□□□ -1.79
TARDBP-220ENST00000618606 WDCPQ9H6R7 721 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 DUSP22Q9NRW4 184 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 WWOXQ9NZC7 414 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 PCDHA3Q9Y5H8 950 aa3.85□□□□□ -1.79
TARDBP-220ENST00000618606 NOTCH4Q99466 2003 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SMIM35A0A1B0GVV1 85 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SMIM22K7EJ46 135 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 QSOX1O00391 747 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SLC16A6O15403 523 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 IL6RP08887 468 aaPredicted RBP3.84□□□□□ -1.79
TARDBP-220ENST00000618606 HK3P52790 923 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 MTMR1Q13613 665 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 ABCB5Q2M3G0 1257 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 ZNF260Q3ZCT1 412 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 PCID2Q5JVF3 399 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 EFCAB2Q5VUJ9 269 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 FAM160B1Q5W0V3 765 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 TMEM108Q6UXF1 575 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 CHSY1Q86X52 802 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 GALNT16Q8N428 558 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 PRR18Q8N4B5 295 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms