RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 PLEKHH3Q7Z736 793 aa13.11□□□□□ -0.31
CIITA-212ENST00000618207 SELENOSQ9BQE4 189 aa13.11□□□□□ -0.31
CIITA-212ENST00000618207 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
CIITA-212ENST00000618207 TXLNGYQ9BZA5 131 aa13.11□□□□□ -0.31
CIITA-212ENST00000618207 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
CIITA-212ENST00000618207 E7EVH7 732 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 IL18RAPO95256 599 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 ERBB2P04626 1255 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 IVLP07476 585 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 ATF2P15336 505 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 AKAP5P24588 427 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 DRG2P55039 364 aaKnown RBP13.1□□□□□ -0.31
CIITA-212ENST00000618207 IFI35P80217 286 aaPredicted RBP13.1□□□□□ -0.31
CIITA-212ENST00000618207 BEX3Q00994 111 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 CCL14Q16627 93 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 DGKDQ16760 1214 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 LONRF1Q17RB8 773 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 RAB6CQ53S08 254 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 C2orf69Q8N8R5 385 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 ART4Q93070 314 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 RAB6CQ9H0N0 254 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 CDC42EP4Q9H3Q1 356 aaKnown RBP13.1□□□□□ -0.31
CIITA-212ENST00000618207 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 DPP3Q9NY33 737 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 HCRTO43612 131 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 MCF2P10911 925 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 CYP2B6P20813 491 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 NDST1P52848 882 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 ADCY1Q08828 1119 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 TAF5Q15542 800 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 KYNUQ16719 465 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 ATL2Q8NHH9 583 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 SNX9Q9Y5X1 595 aa13.1□□□□□ -0.31
CIITA-212ENST00000618207 TP73O15350 636 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 MICAL2O94851 1124 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 EIF4BP23588 611 aaKnown RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 MDH1P40925 334 aaKnown RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 SKOR1P84550 965 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 KLF1Q13351 362 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 SH3PXD2AQ5TCZ1 1133 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 SPRYD7Q5W111 196 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 C12orf50Q8NA57 414 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 HSPH1Q92598 858 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 TMEM176AQ96HP8 235 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 PIWIL1Q96J94 861 aaKnown RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 C9orf72Q96LT7 481 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 SLITRK1Q96PX8 696 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 MYCBPQ99417 103 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 ABHD16BQ9H3Z7 469 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 RIPK2O43353 540 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 CD48P09326 243 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 IL1R2P27930 398 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 CETN2P41208 172 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 FAM102AQ5T9C2 384 aaPredicted RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 DNAJB3Q8WWF6 145 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
CIITA-212ENST00000618207 TMEM121Q9BTD3 319 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 AAASQ9NRG9 546 aa13.09□□□□□ -0.31
CIITA-212ENST00000618207 RGS16O15492 202 aaPredicted RBP13.08□□□□□ -0.31
CIITA-212ENST00000618207 LSM8O95777 96 aaKnown RBP13.08□□□□□ -0.31
CIITA-212ENST00000618207 YWHAEP62258 255 aaKnown RBP13.08□□□□□ -0.31
CIITA-212ENST00000618207 GRB14Q14449 540 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 P3H1Q32P28 736 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 CYP4F22Q6NT55 531 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 LINC01465Q8N7H1 131 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 C7orf31Q8N865 590 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 C3orf20Q8ND61 904 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 SNF8Q96H20 258 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 PARK7Q99497 189 aaKnown RBP13.08□□□□□ -0.31
CIITA-212ENST00000618207 ADAM33Q9BZ11 813 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 NXF3Q9H4D5 531 aaKnown RBP13.08□□□□□ -0.31
CIITA-212ENST00000618207 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 TUBGCP4Q9UGJ1 667 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 TBK1Q9UHD2 729 aa13.08□□□□□ -0.31
CIITA-212ENST00000618207 TCRBV5S1A1TA0A578 114 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 GOLGA8MH3BSY2 632 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 TRIM66O15016 1216 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 CILPO75339 1184 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 CYP2C9P11712 490 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 IVDP26440 423 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 HUNKP57058 714 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 PPP2R2AP63151 447 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 SYCP2LQ5T4T6 812 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 IZUMO3Q5VZ72 239 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 SPOCD1Q6ZMY3 1216 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 ACOT1Q86TX2 421 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 ARFGAP1Q8N6T3 406 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 MAIP1Q8WWC4 291 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 MRRFQ96E11 262 aaKnown RBP13.08□□□□□ -0.32
CIITA-212ENST00000618207 BCO2Q9BYV7 579 aa13.08□□□□□ -0.32
CIITA-212ENST00000618207 PCDHGC3Q9UN70 934 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms