RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 C1orf54Q8WWF1 131 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 C18orf25Q96B23 403 aaPredicted RBP18.52■□□□□ 0.56
CNOT3-209ENST00000617930 ARL8AQ96BM9 186 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 MCEEQ96PE7 176 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 CPXM1Q96SM3 734 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 ADPGKQ9BRR6 497 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 ZNF518BQ9C0D4 1074 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 NXF3Q9H4D5 531 aaKnown RBP18.52■□□□□ 0.56
CNOT3-209ENST00000617930 SAGE1Q9NXZ1 904 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 TUBGCP4Q9UGJ1 667 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 R3HDM2Q9Y2K5 976 aaKnown RBP18.52■□□□□ 0.56
CNOT3-209ENST00000617930 TRIP11Q15643 1979 aa18.52■□□□□ 0.56
CNOT3-209ENST00000617930 COILP38432 576 aaPredicted RBP18.52■□□□□ 0.55
CNOT3-209ENST00000617930 PTPN11Q06124 597 aaPredicted RBP18.52■□□□□ 0.55
CNOT3-209ENST00000617930 ADCY2Q08462 1091 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 SNX17Q15036 470 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 KYAT1Q16773 422 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 SLC27A1Q6PCB7 646 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 TMEM176AQ96HP8 235 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 SNX27Q96L92 541 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 LHX5Q9H2C1 402 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 RNF39Q9H2S5 420 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 CHST7Q9NS84 486 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 TMEM51Q9NW97 253 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.52■□□□□ 0.55
CNOT3-209ENST00000617930 GRHL1Q9NZI5 618 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 ITGA11Q9UKX5 1188 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 SNX24Q9Y343 169 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 UTP11Q9Y3A2 253 aaKnown RBP18.52■□□□□ 0.55
CNOT3-209ENST00000617930 SCINQ9Y6U3 715 aa18.52■□□□□ 0.55
CNOT3-209ENST00000617930 EIF3HO15372 352 aaKnown RBP eCLIP18.51■□□□□ 0.55
CNOT3-209ENST00000617930 KPNA6O60684 536 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 PAEPP09466 180 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 HSPA6P17066 643 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 AKAP5P24588 427 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 KLF1Q13351 362 aaPredicted RBP18.51■□□□□ 0.55
CNOT3-209ENST00000617930 DHX34Q14147 1143 aaKnown RBP18.51■□□□□ 0.55
CNOT3-209ENST00000617930 CLUL1Q15846 466 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 GLRA4Q5JXX5 417 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 ERICH1Q86X53 443 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 ARFGAP1Q8N6T3 406 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 C12orf50Q8NA57 414 aaPredicted RBP18.51■□□□□ 0.55
CNOT3-209ENST00000617930 SH3TC2Q8TF17 1288 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 ATG4AQ8WYN0 398 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 FAXDC2Q96IV6 333 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 LRRC19Q9H756 370 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 KLHL11Q9NVR0 708 aa18.51■□□□□ 0.55
CNOT3-209ENST00000617930 KRT14P02533 472 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 CALB1P05937 261 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 NDST1P52848 882 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 RBP5P82980 135 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 DCAF4L1Q3SXM0 396 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 UBXN11Q5T124 520 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 JOSD2Q8TAC2 188 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 HEMGNQ9BXL5 484 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 SPC25Q9HBM1 224 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 TRIM17Q9Y577 477 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 FAM187AA6NFU0 413 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 H0YGN5 161 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 TP73O15350 636 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 MICAL2O94851 1124 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 ERBB2P04626 1255 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 RALAP11233 206 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 RFC1P35251 1148 aaPredicted RBP18.5■□□□□ 0.55
CNOT3-209ENST00000617930 HSD17B3P37058 310 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 RPL21P46778 160 aaKnown RBP18.5■□□□□ 0.55
CNOT3-209ENST00000617930 SKOR1P84550 965 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 INCA1Q0VD86 236 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 PPP2R5EQ16537 467 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 FAM47CQ5HY64 1035 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 RHOT1Q8IXI2 618 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.5■□□□□ 0.55
CNOT3-209ENST00000617930 TXLNGYQ9BZA5 131 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 CYP3A43Q9HB55 503 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 LRRC4CQ9HCJ2 640 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.5■□□□□ 0.55
CNOT3-209ENST00000617930 NFS1Q9Y697 457 aa18.5■□□□□ 0.55
CNOT3-209ENST00000617930 A6NNZ2 444 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 PSTPIP1O43586 416 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 STAU1O95793 577 aaKnown RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 GNRH1P01148 92 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 GRK4P32298 578 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 MAN1A1P33908 653 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 GPD2P43304 727 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 CCT5P48643 541 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 YWHAEP62258 255 aaKnown RBP18.49■□□□□ 0.55
CNOT3-209ENST00000617930 TUBB8Q3ZCM7 444 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 KCTD16Q68DU8 428 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 DNAJC24Q6P3W2 148 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 KATNAL2Q8IYT4 538 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 C12orf29Q8N999 325 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 C3orf20Q8ND61 904 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 BCAS4Q8TDM0 211 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 FAM118BQ9BPY3 351 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 FAM107BQ9H098 131 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 FAM114A2Q9NRY5 505 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 IP6K2Q9UHH9 426 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 PTPN22Q9Y2R2 807 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 RECQL4O94761 1208 aa18.49■□□□□ 0.55
CNOT3-209ENST00000617930 GJC1P36383 396 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms