RNA–Protein interactions for RNA: ENST00000617649.4

ACACA-240, Transcript of acetyl-CoA carboxylase alpha, human

TSL 5 BASIC

Gene ACACA, Length 7,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-240	ENST00000617649	PPARGC1A	Q9UBK2	798 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	STK39	Q9UEW8	545 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CRLS1	Q9UJA2	301 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CDV3	Q9UKY7	258 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	TRPV2	Q9Y5S1	764 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	UMODL1	Q5DID0	1318 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	DIAPH2	O60879	1101 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	H2AFY	O75367	372 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	VTN	P04004	478 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	KLRK1	P26718	216 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	LAMTOR4	Q0VGL1	99 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	DEFB115	Q30KQ5	88 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	NUGGC	Q68CJ6	796 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	DEFB128	Q7Z7B8	93 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	DSG4	Q86SJ6	1040 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	PRUNE1	Q86TP1	453 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	SNX31	Q8N9S9	440 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	XPO6	Q96QU8	1125 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	FBXL21	Q9UKT6	434 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	TBKBP1	A7MCY6	615 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	SERPIND1	P05546	499 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	MCF2	P10911	925 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ANXA11	P50995	505 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	NCKAP1L	P55160	1127 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CASP8	Q14790	479 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	FHDC1	Q9C0D6	1143 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	METTL5	Q9NRN9	209 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CHD4	Q14839	1912 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649		A0A0G2JND7	137 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	HEATR9	A2RTY3	570 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649		F5H423	210 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ZNF263	O14978	683 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ACVR2B	Q13705	512 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CES5A	Q6NT32	575 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	HS6ST3	Q8IZP7	471 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ELMO2	Q96JJ3	720 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	UROC1	Q96N76	676 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	GLIS2	Q9BZE0	524 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	RAB6B	Q9NRW1	208 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	KLK14	Q9P0G3	267 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	TPX2	Q9ULW0	747 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	SMG5	Q9UPR3	1016 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	MED1	Q15648	1581 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649		A0A1B0GTH6	734 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	HMGB3	O15347	200 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	NCAM2	O15394	837 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	LZTS3	O60299	673 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CLASP2	O75122	1294 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	TRPA1	O75762	1119 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	WEE2	P0C1S8	567 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ITIH2	P19823	946 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	FGFR2	P21802	821 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	SPR	P35270	261 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	GEM	P55040	296 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	NFIA	Q12857	509 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	ZDHHC17	Q8IUH5	632 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	SLC30A5	Q8TAD4	765 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	TACO1	Q9BSH4	297 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	TSEN34	Q9BSV6	310 aa	Known RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	PARD6B	Q9BYG5	372 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	DDIT4	Q9NX09	232 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	MRFAP1	Q9Y605	127 aa		6.91	□□□□□ -1.3
ACACA-240	ENST00000617649	PSEN2	P49810	448 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SP3	Q02447	781 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	PTPN21	Q16825	1174 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	ZNF284	Q2VY69	593 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SPDYA	Q5MJ70	313 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	TRMT10C	Q7L0Y3	403 aa	Known RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	OR9Q1	Q8NGQ5	310 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	ZC3H7B	Q9UGR2	993 aa	Known RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SCAF8	Q9UPN6	1271 aa	Known RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	PXDN	Q92626	1479 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SPAG7	O75391	227 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	PPP3CC	P48454	512 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	CLCN3	P51790	818 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	TROAP	Q12815	778 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	ZNF211	Q13398	564 aa	Predicted RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	TP53BP2	Q13625	1128 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	MYBPC2	Q14324	1141 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	PCSK7	Q16549	785 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	RNF168	Q8IYW5	571 aa	Predicted RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SYTL5	Q8TDW5	730 aa	Predicted RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SPATA17	Q96L03	361 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SH2D3A	Q9BRG2	576 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	PKD2L2	Q9NZM6	624 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	CD274	Q9NZQ7	290 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	PCDHB5	Q9Y5E4	795 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	ZRANB3	Q5FWF4	1079 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	FBXO47	Q5MNV8	452 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	CCDC149	Q6ZUS6	474 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	ZNF438	Q7Z4V0	828 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	VPS37A	Q8NEZ2	397 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	REPS2	Q8NFH8	660 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	SMARCD1	Q96GM5	515 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	RPRD1A	Q96P16	312 aa	Predicted RBP	6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	MTMR12	Q9C0I1	747 aa		6.9	□□□□□ -1.3
ACACA-240	ENST00000617649	TMEM117	Q9H0C3	514 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms