RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 GAS7O60861 476 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 RPL5P46777 297 aaKnown RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 MOGSQ13724 837 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ARSHQ5FYA8 562 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 C6orf52Q5T4I8 152 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ZSCAN18Q8TBC5 510 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 E2F7Q96AV8 911 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TRPV6Q9H1D0 765 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 IL1RAPL1Q9NZN1 696 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CLEC11AQ9Y240 323 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 A8MXQ7 604 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 UQCRBP14927 111 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TRIM28Q13263 835 aaKnown RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 RARS2Q5T160 578 aaKnown RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CLVS1Q8IUQ0 354 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TMEM109Q9BVC6 243 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 RRN3Q9NYV6 651 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TAGLN3Q9UI15 199 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ADGRA3Q8IWK6 1321 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 WDR64B1ANS9 1081 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CSPG5O95196 566 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 EIF4BP23588 611 aaKnown RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ERFEQ4G0M1 354 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CCDC33Q8N5R6 958 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 SHKBP1Q8TBC3 707 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 PCDHA3Q9Y5H8 950 aa14.66□□□□□ -0.06
TNFRSF11A-205ENST00000616710 GOLGA8QA0A0J9YX86 632 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 GOLGA8OA6NCC3 632 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 DCAF8L1A6NGE4 600 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 GOLGA8NF8WBI6 632 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 PIK3CDO00329 1044 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 STT3AP46977 705 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 PKNOX1P55347 436 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 GAD2Q05329 585 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 FAAP100Q0VG06 881 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ARHGAP27Q6ZUM4 889 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 LRRN4Q8WUT4 740 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 NLRP7Q8WX94 980 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CBWD1Q9BRT8 395 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ACSS2Q9NR19 701 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 MAN1C1Q9NR34 630 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 SMYD2Q9NRG4 433 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TBC1D23Q9NUY8 699 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 E9PBE3 544 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TPST1O60507 370 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 KLHL41O60662 606 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TRMUO75648 421 aaKnown RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 FAM155BO75949 473 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 S100BP04271 92 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ETFBP38117 255 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 RPS8P62241 208 aaKnown RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CARTPTQ16568 116 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ATG16L1Q676U5 607 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TXNRD3Q86VQ6 643 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 MPHOSPH6Q99547 160 aaKnown RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 SIX2Q9NPC8 291 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TRNAU1APQ9NX07 287 aaKnown RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 MINPP1Q9UNW1 487 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CRYBG1Q9Y4K1 1723 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 H7C0C1 242 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 RIMBP2O15034 1052 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 SPTLC1O15269 473 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 POLR2MP0CAP2 368 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 SERPINB5P36952 375 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 ATP5OP48047 213 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 COPAP53621 1224 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 PDE1BQ01064 536 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 NDUFAF2Q8N183 169 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CASP10Q92851 521 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TMA16Q96EY4 203 aaKnown RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 TOPORSQ9NS56 1045 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 MYH4Q9Y623 1939 aa14.65□□□□□ -0.06
TNFRSF11A-205ENST00000616710 CAMTA2O94983 1202 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 OCM2P0CE71 109 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 OCMP0CE72 109 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 FGFR1P11362 822 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 HDAC4P56524 1084 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 BST1Q10588 318 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 MAP3K21Q5TCX8 1036 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 PLEKHA7Q6IQ23 1121 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 TREML1Q86YW5 311 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 SLFN12Q8IYM2 578 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 ADA2Q9NZK5 511 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 SOX13Q9UN79 622 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 ZNF652Q9Y2D9 606 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 SMIM31A0A1B0GVY4 71 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 NDUFB5O43674 189 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 CD19P15391 556 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 NRLP54845 237 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 C16orf46Q6P387 395 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 ACAD11Q709F0 780 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 ETNPPLQ8TBG4 499 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 MMP19Q99542 508 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 AGPAT3Q9NRZ7 376 aa14.64□□□□□ -0.07
TNFRSF11A-205ENST00000616710 PLA2G4CQ9UP65 541 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms