RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 STAG2Q8N3U4 1231 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 APLFQ8IW19 511 aaPredicted RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 USB1Q9BQ65 265 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 ECSITQ9BQ95 431 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 AP1M1Q9BXS5 423 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 GREM2Q9H772 168 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 V9GYQ6 96 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 NCAM2O15394 837 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 SERPING1P05155 500 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 ANXA5P08758 320 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 NUDT2P50583 147 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 STX5Q13190 355 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 KCNK10P57789 538 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 GAL3ST3Q96A11 431 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 MCCC1Q96RQ3 725 aaPredicted RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 KLHL1Q9NR64 748 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 ADAM30Q9UKF2 790 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 EIF3LQ9Y262 564 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 IFT140Q96RY7 1462 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 JAK2O60674 1132 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 ADD1P35611 737 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 RGS7P49802 495 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 CCNIQ14094 377 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 ERMARDQ5T6L9 678 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 MICU2Q8IYU8 434 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 HDDC3Q8N4P3 179 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 DHRS1Q96LJ7 313 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 XPO4Q9C0E2 1151 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 RACGAP1Q9H0H5 632 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
TCF4-248ENST00000616053 POLG2Q9UHN1 485 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
TCF4-248ENST00000616053 HECW1Q76N89 1606 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 AP1S1P61966 158 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 ADCY2Q08462 1091 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 PTK6Q13882 451 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 PCYOX1LQ8NBM8 494 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 MDM1Q8TC05 714 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 RPRD1AQ96P16 312 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 SLC9A8Q9Y2E8 581 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 GGPS1O95749 300 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 EIF4BP23588 611 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 HNRNPH2P55795 449 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 TYW3Q6IPR3 259 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 LGR6Q9HBX8 967 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 JPH1Q9HDC5 661 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 AGO2Q9UKV8 859 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 ABL2P42684 1182 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 QARSP47897 775 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 MTMR2Q13614 643 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CYP20A1Q6UW02 462 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CCDC185Q8N715 623 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 SOAT2O75908 522 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 NFKB1P19838 968 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CBX5P45973 191 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CDK8P49336 464 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 SERPINH1P50454 418 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 KRT74Q7RTS7 529 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 SUSD6Q92537 303 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 TESCQ96BS2 214 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 RNF208Q9H0X6 261 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 FAM25AB3EWG3 89 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 FAM25CB3EWG5 89 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 FAM25GB3EWG6 89 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CDC40O60508 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
TCF4-248ENST00000616053 PARNO95453 639 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 CCDC166P0CW27 439 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 SLC2A3P11169 496 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 ITGA3P26006 1051 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 GTF2A2P52657 109 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 AP3M2P53677 418 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CYTH1Q15438 398 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 ZNHIT3Q15649 155 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
TCF4-248ENST00000616053 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 ARHGEF11O15085 1522 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 C12orf50Q8NA57 414 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 DCTN4Q9UJW0 460 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 TSC22D2O75157 780 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 WDR72Q3MJ13 1102 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 AASDHQ4L235 1098 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 DYNLL2Q96FJ2 89 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 PACSIN1Q9BY11 444 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 HDHD2Q9H0R4 259 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 CLEC4MQ9H2X3 399 aaPredicted RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 FANCFQ9NPI8 374 aa13.13□□□□□ -0.31
TCF4-248ENST00000616053 HERC5Q9UII4 1024 aaKnown RBP13.13□□□□□ -0.31
TCF4-248ENST00000616053 HOXA7P31268 230 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms