RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 BAZ2BQ9UIF8 2168 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CASZ1Q86V15 1759 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 KPNA7A9QM74 516 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CA12O43570 354 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 PSTPIP1O43586 416 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 PNMA6AP0CW24 399 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 GJC2Q5T442 439 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 TMEM86AQ8N2M4 240 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CD99L2Q8TCZ2 262 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 BCAS4Q8TDM0 211 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 UCMAQ8WVF2 138 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 EXT2Q93063 718 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 DCUN1D1Q96GG9 259 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 FBXO44Q9H4M3 255 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CYP4F11Q9HBI6 524 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 A0A087X0B3 334 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 H0Y626 953 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ATP9BO43861 1147 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CST8O60676 142 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 DNAJB2P25686 324 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 MAP3K7CLP57077 242 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 GTF2BQ00403 316 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 CENPCQ03188 943 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ZSCAN26Q16670 478 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 E4F1Q66K89 784 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 USP33Q8TEY7 942 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ALKBH8Q96BT7 664 aaKnown RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 RPRD1AQ96P16 312 aaPredicted RBP9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 DEFB118Q96PH6 123 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 TRAIPQ9BWF2 469 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 TRIM54Q9BYV2 358 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 THAP2Q9H0W7 228 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 ABCF3Q9NUQ8 709 aa9.88□□□□□ -0.83
CLTCL1-208ENST00000615606 A0A1B0GUA9 196 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 BYSLQ13895 437 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 E2F5Q15329 346 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 USP38Q8NB14 1042 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 GAD1Q99259 594 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 HSD17B14Q9BPX1 270 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 VPS11Q9H270 941 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 AMACRQ9UHK6 382 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 RIPK3Q9Y572 518 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 MAPK13O15264 365 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 PCK1P35558 622 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 CLCN6P51797 869 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 MTA1Q13330 715 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 ARHGEF7Q14155 803 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SH3RF1Q7Z6J0 888 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 MIB1Q86YT6 1006 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 ZBTB45Q96K62 511 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 WDR24Q96S15 920 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 TLR8Q9NR97 1041 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 RAB6BQ9NRW1 208 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 UBA6A0AVT1 1052 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 MAP3K7O43318 606 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 PAEPP09466 180 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 KLRC2P26717 231 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 AVPR1AP37288 418 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 NDST1P52848 882 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 NSUN2Q08J23 767 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 GTF2H3Q13889 308 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 PDK2Q15119 407 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SMARCD1Q96GM5 515 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 RAB3IPQ96QF0 476 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SARS2Q9NP81 518 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 PDGFCQ9NRA1 345 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 RRN3Q9NYV6 651 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 BTBD7Q9P203 1132 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 A0A087X0T9 212 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 FAM237AA0A1B0GTK4 181 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 RASA4BC9J798 803 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 ANKRD63C9JTQ0 380 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 RASA4O43374 803 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 DUSP11O75319 330 aaKnown RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 MMP3P08254 477 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 FAM228BP0C875 321 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SESN2P58004 480 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 ITGB3BPQ13352 177 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SMTNL2Q2TAL5 461 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 CCDC197Q8NCU1 140 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 SLC35C1Q96A29 364 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 AGAP3Q96P47 875 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 CNPY3Q9BT09 278 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 FRMD8P1Q9BZ68 369 aaPredicted RBP9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 FOXP3Q9BZS1 431 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 ELOVL4Q9GZR5 314 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 TMEM51Q9NW97 253 aa9.87□□□□□ -0.83
CLTCL1-208ENST00000615606 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ADCY6O43306 1168 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 APRTP07741 180 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 RBP3P10745 1247 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ELNP15502 786 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 ITIH2P19823 946 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 NR1D1P20393 614 aa9.86□□□□□ -0.83
CLTCL1-208ENST00000615606 TUFMP49411 452 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms