RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ZNF844Q08AG5 666 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 CUL1Q13616 776 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 PTPROQ16827 1216 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 PEX26Q7Z412 305 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 MAP4K3Q8IVH8 894 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 ZNF317Q96PQ6 595 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 RAB3IPQ96QF0 476 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 FDXACB1Q9BRP7 624 aaPredicted RBP13.82□□□□□ -0.2
FOXN3-219ENST00000615335 CTTNBP2NLQ9P2B4 639 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 INTUQ9ULD6 942 aa13.82□□□□□ -0.2
FOXN3-219ENST00000615335 A0A0A6YYK5 440 aaPredicted RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 CCDC166P0CW27 439 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 CTNNA1P35221 906 aaKnown RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 HSD17B3P37058 310 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 TUBP50607 506 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 KIZQ2M2Z5 673 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 TAS1R3Q7RTX0 852 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 CFAP61Q8NHU2 1237 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 PRCCQ92733 491 aaPredicted RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.27e-8■■■□□ 16.4
FOXN3-219ENST00000615335 YIPF2Q9BWQ6 316 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 AP1M1Q9BXS5 423 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 C2orf40Q9H1Z8 148 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 CNOT8Q9UFF9 292 aaKnown RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 OGDHLQ9ULD0 1010 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 AGAP1Q9UPQ3 857 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 INO80B-WBP1J3KQ70 363 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 DDX3XO00571 662 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■□□□ 13.3
FOXN3-219ENST00000615335 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 TMCC1O94876 653 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 STAT1P42224 750 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 PHKA2P46019 1235 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 GPC3P51654 580 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 COPS2P61201 443 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 OR52E8Q6IFG1 317 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 GJB7Q6PEY0 223 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 SLFN11Q7Z7L1 901 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 SYCE1Q8N0S2 351 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 U2AF1L4Q8WU68 220 aaKnown RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 RPS6KC1Q96S38 1066 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 INO80BQ9C086 356 aaPredicted RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 TMEM134Q9H6X4 195 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 IFT122Q9HBG6 1241 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 AGPAT3Q9NRZ7 376 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 NOD1Q9Y239 953 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 USP20Q9Y2K6 914 aa13.81□□□□□ -0.2
FOXN3-219ENST00000615335 NOC2LQ9Y3T9 749 aaKnown RBP13.81□□□□□ -0.2
FOXN3-219ENST00000615335 KIAA0100Q14667 2235 aaKnown RBP13.8□□□□□ -0.2
FOXN3-219ENST00000615335 TISP43B9A030 160 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 CCDC188H7C350 402 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 GFPT2O94808 682 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 PTENP60484 403 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 MAPK6Q16659 721 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 GALNTL6Q49A17 601 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 TAF2Q6P1X5 1199 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 ARMC5Q96C12 935 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 DLGAP2Q9P1A6 1054 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 SUN2Q9UH99 717 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 KRIT1O00522 736 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 MAP3K13O43283 966 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 SART1O43290 800 aaKnown RBP13.8□□□□□ -0.2
FOXN3-219ENST00000615335 E2F6O75461 281 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 CSDE1O75534 798 aaKnown RBP13.8□□□□□ -0.2
FOXN3-219ENST00000615335 SGPL1O95470 568 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 CALB2P22676 271 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 PSMC2P35998 433 aaKnown RBP13.8□□□□□ -0.2
FOXN3-219ENST00000615335 MAGEA10P43363 369 aaPredicted RBP13.8□□□□□ -0.2
FOXN3-219ENST00000615335 POU5F1BQ06416 359 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 DAAM2Q86T65 1068 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 FAM186BQ8IYM0 893 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 PREBQ9HCU5 417 aa13.8□□□□□ -0.2
FOXN3-219ENST00000615335 TRMT13Q9NUP7 481 aaKnown RBP13.8□□□□□ -0.2
FOXN3-219ENST00000615335 PDHA1P08559 390 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 KRT16P08779 473 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 ECHS1P30084 290 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 SKIV2L2P42285 1042 aaKnown RBP13.79□□□□□ -0.2
FOXN3-219ENST00000615335 LIG4P49917 911 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 MAGOHP61326 146 aaKnown RBP13.79□□□□□ -0.2
FOXN3-219ENST00000615335 BNIP1Q12981 228 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 MPP3Q13368 585 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 ZNF365Q70YC5 407 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 ZNF410Q86VK4 478 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 NME8Q8N427 588 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 RASGEF1CQ8N431 466 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 MAGOHBQ96A72 148 aaKnown RBP13.79□□□□□ -0.2
FOXN3-219ENST00000615335 NFKBIZQ9BYH8 718 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 PHACTR1Q9C0D0 580 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 DDX47Q9H0S4 455 aaKnown RBP13.79□□□□□ -0.2
FOXN3-219ENST00000615335 CCDC134Q9H6E4 229 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 RNPEPL1Q9HAU8 725 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 ANKRD63C9JTQ0 380 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 UBOX5O94941 541 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 UPP2O95045 317 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 PRKCBP05771 671 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 MYBL1P10243 752 aa13.79□□□□□ -0.2
FOXN3-219ENST00000615335 GJA8P48165 433 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms