RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 SPPL2BQ8TCT7 592 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 NUP62CLQ9H1M0 184 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 DPEP3Q9H4B8 488 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 KCNK12Q9HB15 430 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 EPS15L1Q9UBC2 864 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 PCDHB5Q9Y5E4 795 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 HAPLN1P10915 354 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-211ENST00000615061 GJA1P17302 382 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 CEBPBP17676 345 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 CYP2F1P24903 491 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 GNL1P36915 607 aaPredicted RBP17.89■□□□□ 0.45
CBWD3-211ENST00000615061 SGSM1Q2NKQ1 1148 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 PRSS36Q5K4E3 855 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 NPAS3Q8IXF0 933 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 GIPC2Q8TF65 315 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 SNX25Q9H3E2 840 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 APOBEC3GQ9HC16 384 aaKnown RBP17.89■□□□□ 0.45
CBWD3-211ENST00000615061 TMEM8AQ9HCN3 771 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 CDH7Q9ULB5 785 aa17.89■□□□□ 0.45
CBWD3-211ENST00000615061 MYL4P12829 197 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 MXI1P50539 228 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 EPHB3P54753 998 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 ENPEPQ07075 957 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 SMARCB1Q12824 385 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 NFE2Q16621 373 aaPredicted RBP17.88■□□□□ 0.45
CBWD3-211ENST00000615061 CBWD6Q4V339 395 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 CBWD3Q5JTY5 395 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 CBWD5Q5RIA9 395 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 FAM171BQ6P995 826 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 PDZD4Q76G19 769 aaPredicted RBP17.88■□□□□ 0.45
CBWD3-211ENST00000615061 TMC8Q8IU68 726 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 C2orf15Q8WU43 125 aaKnown RBP17.88■□□□□ 0.45
CBWD3-211ENST00000615061 SEMA4DQ92854 862 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 MED15Q96RN5 788 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 LRRC3Q9BY71 257 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 ZNF334Q9HCZ1 680 aaPredicted RBP17.88■□□□□ 0.45
CBWD3-211ENST00000615061 HSFX1Q9UBD0 423 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 ARMCX3Q9UH62 379 aaPredicted RBP17.88■□□□□ 0.45
CBWD3-211ENST00000615061 CDH9Q9ULB4 789 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 MYH10P35580 1976 aa17.88■□□□□ 0.45
CBWD3-211ENST00000615061 MOSPD3O75425 235 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 ASPAP45381 313 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 TUFMP49411 452 aaKnown RBP17.87■□□□□ 0.45
CBWD3-211ENST00000615061 PLD1Q13393 1074 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 KRT39Q6A163 491 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 DNAJB7Q7Z6W7 309 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-211ENST00000615061 SLC35C1Q96A29 364 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 MYLPFQ96A32 169 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 MCRS1Q96EZ8 462 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 AVENQ9NQS1 362 aaPredicted RBP17.87■□□□□ 0.45
CBWD3-211ENST00000615061 ASAH2Q9NR71 780 aa17.87■□□□□ 0.45
CBWD3-211ENST00000615061 GREB1Q4ZG55 1949 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 DENND4CQ5VZ89 1909 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 BICDL2A1A5D9 508 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 A8MXQ7 604 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 EPHA5P54756 1037 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 NOP14P78316 857 aaKnown RBP17.86■□□□□ 0.45
CBWD3-211ENST00000615061 ZXDAP98168 799 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 ORC1Q13415 861 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 DDR2Q16832 855 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 MDH1BQ5I0G3 518 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 CYP4A22Q5TCH4 519 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 FILIP1Q7Z7B0 1213 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 SPATA2LQ8IUW3 424 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-211ENST00000615061 FAM200AQ8TCP9 573 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 TAF4BQ92750 862 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 FGF14Q92915 247 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 PSMG2Q969U7 264 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 PCED1BQ96HM7 432 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 CEP63Q96MT8 703 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 RPP25Q9BUL9 199 aaKnown RBP17.86■□□□□ 0.45
CBWD3-211ENST00000615061 HMGXB4Q9UGU5 601 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 SORCS3Q9UPU3 1222 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 GTF2H1P32780 548 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 CYP27A1Q02318 531 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 DPCR1Q3MIW9 517 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 CCDC40Q4G0X9 1142 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 PARM1Q6UWI2 310 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 EDAQ92838 391 aa17.86■□□□□ 0.45
CBWD3-211ENST00000615061 A0A1W2PRU2 124 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 PTPN1P18031 435 aaKnown RBP17.85■□□□□ 0.45
CBWD3-211ENST00000615061 MTMR3Q13615 1198 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 HTR4Q13639 388 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 CFAP221Q4G0U5 840 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 GAREM2Q75VX8 874 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 FBXL13Q8NEE6 735 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 SHKBP1Q8TBC3 707 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 MYCBPAPQ8TBZ2 947 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 SRRTQ9BXP5 876 aaKnown RBP17.85■□□□□ 0.45
CBWD3-211ENST00000615061 IMPG2Q9BZV3 1241 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 NUMBLQ9Y6R0 609 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 ZNF638Q14966 1978 aaKnown RBP17.85■□□□□ 0.45
CBWD3-211ENST00000615061 OBSL1O75147 1896 aa17.85■□□□□ 0.45
CBWD3-211ENST00000615061 GOLGA6L22H0YM25 854 aa17.84■□□□□ 0.45
CBWD3-211ENST00000615061 NARSO43776 548 aaKnown RBP17.84■□□□□ 0.45
CBWD3-211ENST00000615061 FAM163BP0C2L3 166 aa17.84■□□□□ 0.45
CBWD3-211ENST00000615061 BDNFP23560 247 aa17.84■□□□□ 0.45
CBWD3-211ENST00000615061 TEAD2Q15562 447 aa17.84■□□□□ 0.45
CBWD3-211ENST00000615061 STXBP5Q5T5C0 1151 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms