RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CYLC2Q14093 348 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TLR1Q15399 786 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GRIK4Q16099 956 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 C21orf62-AS1Q17RA5 79 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MAJINQ3KP22 176 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 ARSJQ5FYB0 599 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 METTL21CQ5VZV1 264 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PM20D1Q6GTS8 502 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TMEM132EQ6IEE7 984 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KIAA1841Q6NSI8 718 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KLC3Q6P597 504 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SEZ6L2Q6UXD5 910 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 C15orf52Q6ZUT6 534 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MAP4K3Q8IVH8 894 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CNBD1Q8NA66 436 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 OR6P1Q8NGX9 317 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PLBD2Q8NHP8 589 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 IFI44Q8TCB0 444 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 RHBDD1Q8TEB9 315 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 NCLNQ969V3 563 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 ANAPC16Q96DE5 110 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 REXO5Q96IC2 774 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 OPALINQ96PE5 141 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CDRT15Q96T59 188 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CRB3Q9BUF7 120 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PHF20Q9BVI0 1012 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 BRIP1Q9BX63 1249 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 NUF2Q9BZD4 464 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KRT23Q9C075 422 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 WDR12Q9GZL7 423 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CCDC8Q9H0W5 538 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KIF17Q9P2E2 1029 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CTNNAL1Q9UBT7 734 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PTBP2Q9UKA9 531 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 HCN2Q9UL51 889 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CNOT6Q9ULM6 557 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 AGAP1Q9UPQ3 857 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 DTX4Q9Y2E6 619 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GPC6Q9Y625 555 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TTC41PQ6P2S7 1318 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MSH6P52701 1360 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CLIP1P30622 1438 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SYCE3A1L190 88 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 HEATR9A2RTY3 570 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 LCHNA4D1U4 455 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CTAGE9A4FU28 777 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GOLGA8JA6NMD2 632 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SNTNA6NMZ2 147 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SRRM3A6NNA2 597 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PSMD9O00233 223 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GABRDO14764 452 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SMAD7O15105 426 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TXNL1O43396 289 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 HYAL3O43820 417 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TLR2O60603 784 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 NIPSNAP2O75323 286 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KLHL2O95198 593 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 ATP6V1G2O95670 118 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MBD3O95983 291 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CHRNA1P02708 482 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GSTA2P09210 222 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CCDC192P0DO97 292 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CSF2RAP15509 400 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 ALOX12P18054 663 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MAPK3P27361 379 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TRHRP34981 398 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MSH2P43246 934 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 HSPA13P48723 471 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TUBP50607 506 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GPX6P59796 221 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 RNASELQ05823 741 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GFPT1Q06210 699 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TBL3Q12788 808 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GALEQ14376 348 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SF3B4Q15427 424 aaKnown RBP eCLIP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 MMEL1Q495T6 779 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 LACTB2Q53H82 288 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 TDRD12Q587J7 1177 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SPDYAQ5MJ70 313 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KANK2Q63ZY3 851 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SNRNP48Q6IEG0 339 aaKnown RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 RAB12Q6IQ22 244 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 ANO7Q6IWH7 933 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 FAM122CQ6P4D5 195 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 BORAQ6PGQ7 559 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 B3GNT6Q6ZMB0 384 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 KIF6Q6ZMV9 814 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 BEND4Q6ZU67 534 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CHST15Q7LFX5 561 aaPredicted RBP3.2□□□□□ -1.9
CBWD3-209ENST00000614377 NUP54Q7Z3B4 507 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 STRA8Q7Z7C7 330 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 GLRX5Q86SX6 157 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 P3H2Q8IVL5 708 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 SLFN12Q8IYM2 578 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 CSGALNACT2Q8N6G5 542 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 AVL9Q8NBF6 648 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 PPFIBP2Q8ND30 876 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 LRRN4CLQ8ND94 238 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 FAM216AQ8WUB2 273 aa3.2□□□□□ -1.9
CBWD3-209ENST00000614377 DYDC1Q8WWB3 177 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms