RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 ZNF317Q96PQ6 595 aaPredicted RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 STK33Q9BYT3 514 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 FAM129AQ9BZQ8 928 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 NXF1Q9UBU9 619 aaKnown RBP10.54□□□□□ -0.72
GGA3-221ENST00000614198 PTCH2Q9Y6C5 1203 aa10.54□□□□□ -0.72
GGA3-221ENST00000614198 C17orf102A2RUQ5 167 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 OGTO15294 1046 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 HCRTO43612 131 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 PALMO75781 387 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 PYGLP06737 847 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 NQO1P15559 274 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 ECHS1P30084 290 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 MAGOHP61326 146 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 MTFR1Q15390 333 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 IFI16Q16666 785 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 ZACNQ401N2 412 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 C15orf39Q6ZRI6 1047 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 CATSPER4Q7RTX7 472 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 ADAT2Q7Z6V5 191 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 MDM1Q8TC05 714 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 MAGOHBQ96A72 148 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 C18orf25Q96B23 403 aaPredicted RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 TSC22D3Q99576 134 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 OSGEPQ9NPF4 335 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 PIN4Q9Y237 131 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 PRUNE2Q8WUY3 3088 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 SPTBN5Q9NRC6 3674 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 MAGEB2O15479 319 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 RAD51CO43502 376 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 MTMR3Q13615 1198 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 MYBPC2Q14324 1141 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 ZFAND2BQ8WV99 257 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 DYDC1Q8WWB3 177 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 LPIN3Q9BQK8 851 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 LUC7LQ9NQ29 371 aaKnown RBP10.53□□□□□ -0.72
GGA3-221ENST00000614198 TRIM17Q9Y577 477 aa10.53□□□□□ -0.72
GGA3-221ENST00000614198 GTPBP10A4D1E9 387 aaKnown RBP10.52□□□□□ -0.72
GGA3-221ENST00000614198 MBLAC1A4D2B0 266 aaPredicted RBP10.52□□□□□ -0.72
GGA3-221ENST00000614198 INHAP05111 366 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 RANBP1P43487 201 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 DAB2IPQ5VWQ8 1189 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 ZPBP2Q6X784 338 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 APLFQ8IW19 511 aaPredicted RBP10.52□□□□□ -0.72
GGA3-221ENST00000614198 RPUSD2Q8IZ73 545 aaKnown RBP10.52□□□□□ -0.72
GGA3-221ENST00000614198 ARRDC4Q8NCT1 418 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 FAM167BQ9BTA0 163 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 TRPV6Q9H1D0 765 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 NAGPAQ9UK23 515 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 NOC2LQ9Y3T9 749 aaKnown RBP10.52□□□□□ -0.72
GGA3-221ENST00000614198 RPS6KL1Q9Y6S9 549 aa10.52□□□□□ -0.72
GGA3-221ENST00000614198 KIAA0100Q14667 2235 aaKnown RBP10.52□□□□□ -0.72
GGA3-221ENST00000614198 CHRNB2P17787 502 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 STAT1P42224 750 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 CTCFP49711 727 aaPredicted RBP10.52□□□□□ -0.73
GGA3-221ENST00000614198 GJA9P57773 515 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 NCOA4Q13772 614 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 KIF22Q14807 665 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 SNX17Q15036 470 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 SLC18A3Q16572 532 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ANKRD20A2Q5SQ80 823 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ANKRD20A1Q5TYW2 823 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ANKRD20A3Q5VUR7 823 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 SLFN12LQ6IEE8 588 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 TRPM8Q7Z2W7 1104 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 SESTD1Q86VW0 696 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 LPPQ93052 612 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ARHGEF26Q96DR7 871 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 HMGXB4Q9UGU5 601 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 SCN1AP35498 2009 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ECEL1O95672 775 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 CHRNA1P02708 482 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ITGB3P05106 788 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 TRIM68Q6AZZ1 485 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ALKBH5Q6P6C2 394 aaKnown RBP10.52□□□□□ -0.73
GGA3-221ENST00000614198 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 GALNT15Q8N3T1 639 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 TMC2Q8TDI7 906 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 BTBD6Q96KE9 485 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 ZFP42Q96MM3 310 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 OSBPL1AQ9BXW6 950 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 AGO3Q9H9G7 860 aaKnown RBP10.52□□□□□ -0.73
GGA3-221ENST00000614198 SIX4Q9UIU6 781 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 AGAP1Q9UPQ3 857 aa10.52□□□□□ -0.73
GGA3-221ENST00000614198 DCDC2CA8MYV0 355 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 H0YCG3 227 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 GJB6O95452 261 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 GNAT1P11488 350 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 LLGL1Q15334 1064 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 CCDC38Q502W7 563 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TMEM270Q6UE05 265 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TLCD1Q96CP7 247 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 THAP2Q9H0W7 228 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 C2orf40Q9H1Z8 148 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TUBGCP4Q9UGJ1 667 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 TNFSF13BQ9Y275 285 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
GGA3-221ENST00000614198 BHMG1C9JSJ3 638 aaPredicted RBP10.51□□□□□ -0.73
GGA3-221ENST00000614198 EIF4BP23588 611 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms