RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 RUVBL2Q9Y230 463 aaKnown RBP16.09■□□□□ 0.17
TNXB-209ENST00000613214 HIST2H2ACQ16777 129 aaPredicted RBP16.09■□□□□ 0.17
TNXB-209ENST00000613214 HIST2H2AA3Q6FI13 130 aa16.09■□□□□ 0.17
TNXB-209ENST00000613214 CLEC4GQ6UXB4 293 aa16.09■□□□□ 0.17
TNXB-209ENST00000613214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.09■□□□□ 0.17
TNXB-209ENST00000613214 ATG4CQ96DT6 458 aa16.09■□□□□ 0.17
TNXB-209ENST00000613214 MTERF3Q96E29 417 aa16.09■□□□□ 0.17
TNXB-209ENST00000613214 KRT84Q9NSB2 600 aa16.09■□□□□ 0.17
TNXB-209ENST00000613214 DAGLAQ9Y4D2 1042 aa16.09■□□□□ 0.17
TNXB-209ENST00000613214 ENO2P09104 434 aaPredicted RBP16.08■□□□□ 0.17
TNXB-209ENST00000613214 FLT3P36888 993 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 HSPA9P38646 679 aaKnown RBP16.08■□□□□ 0.17
TNXB-209ENST00000613214 YWHAZP63104 245 aaKnown RBP16.08■□□□□ 0.17
TNXB-209ENST00000613214 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 EMBQ6PCB8 327 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 DCP1BQ8IZD4 617 aaKnown RBP16.08■□□□□ 0.17
TNXB-209ENST00000613214 OSBPL5Q9H0X9 879 aaPredicted RBP16.08■□□□□ 0.17
TNXB-209ENST00000613214 PHF20L1A8MW92 1017 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 RGS4P49798 205 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 MAPRE2Q15555 327 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 GLT1D1Q96MS3 346 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 RBM15Q96T37 977 aaKnown RBP eCLIP16.08■□□□□ 0.17
TNXB-209ENST00000613214 RHBGQ9H310 441 aa16.08■□□□□ 0.17
TNXB-209ENST00000613214 AP1G2O75843 785 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 MT-CO1P00395 513 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 ABCE1P61221 599 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 POLD3Q15054 466 aaPredicted RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 SEMA4DQ92854 862 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 STN1Q9H668 368 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 GPRC5CQ9NQ84 441 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 AGPAT5Q9NUQ2 364 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 APEX2Q9UBZ4 518 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 KATNA1O75449 491 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 GPD1P21695 349 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 S100A5P33763 92 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 CASP4P49662 377 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 KCNK10P57789 538 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 SHC4Q6S5L8 630 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 CLIP3Q96DZ5 547 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 AHCYL2Q96HN2 611 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 TARS2Q9BW92 718 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 PARVBQ9HBI1 364 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 SMPD4Q9NXE4 827 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 ATP12AP54707 1039 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 OVGP1Q12889 678 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 GJC2Q5T442 439 aaPredicted RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 LLGL2Q6P1M3 1020 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 ECSITQ9BQ95 431 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 MOV10L1Q9BXT6 1211 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 CAAP1Q9H8G2 361 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 FBXO2Q9UK22 296 aaPredicted RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 CLK2P49760 499 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 THAP11Q96EK4 314 aa16.08■□□□□ 0.16
TNXB-209ENST00000613214 TRMT6Q9UJA5 497 aaKnown RBP16.08■□□□□ 0.16
TNXB-209ENST00000613214 CBX4O00257 560 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 CD4P01730 458 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 TFE3P19532 575 aaPredicted RBP16.07■□□□□ 0.16
TNXB-209ENST00000613214 SREBF2Q12772 1141 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 SGSM1Q2NKQ1 1148 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 MTHFD1LQ6UB35 978 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 TRIM72Q6ZMU5 477 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 TSPAN17Q96FV3 270 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 DEFB129Q9H1M3 183 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 TRPC4Q9UBN4 977 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 NR3C2P08235 984 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 DSG3P32926 999 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 C16orf59Q7L2K0 433 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 HEATR4Q86WZ0 1026 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 RFFLQ8WZ73 363 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.07■□□□□ 0.16
TNXB-209ENST00000613214 SLC9A8Q9Y2E8 581 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 CLCN3P51790 818 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 ZC3H15Q8WU90 426 aaKnown RBP16.07■□□□□ 0.16
TNXB-209ENST00000613214 DPF2Q92785 391 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 BTN2A1Q7KYR7 527 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 POP1Q99575 1024 aaKnown RBP16.07■□□□□ 0.16
TNXB-209ENST00000613214 ANKARQ7Z5J8 1434 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 IQCMA0A1B0GVH7 501 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 CCDC22O60826 627 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 ODC1P11926 461 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 SOX10P56693 466 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 NOTUMQ6P988 496 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 RGL4Q8IZJ4 473 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 PNMA5Q96PV4 448 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 FBXO28Q9NVF7 368 aa16.07■□□□□ 0.16
TNXB-209ENST00000613214 USP6P35125 1406 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 GNG14A0A1W2PPG7 69 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 STX7O15400 261 aaKnown RBP16.06■□□□□ 0.16
TNXB-209ENST00000613214 GMFGO60234 142 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 TAP1Q03518 808 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 TSC22D1Q15714 1073 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 USP39Q53GS9 565 aaKnown RBP16.06■□□□□ 0.16
TNXB-209ENST00000613214 XKR3Q5GH77 459 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 PARP9Q8IXQ6 854 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 IL17RAQ96F46 866 aa16.06■□□□□ 0.16
TNXB-209ENST00000613214 EXO5Q9H790 373 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms