RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 PCDHB4Q9Y5E5 795 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 IGKV6-21A0A0C4DH24 114 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 RIPK2O43353 540 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 FAM189A1O60320 539 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 GJB1P08034 283 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 TXNP10599 105 aaKnown RBP13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 ACADSP16219 412 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 CUL2Q13617 745 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 ZPBP2Q6X784 338 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 RNF149Q8NC42 400 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 GRAMD1AQ96CP6 724 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 SEMA4AQ9H3S1 761 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 PPME1Q9Y570 386 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 NUB1Q9Y5A7 615 aa13.34□□□□□ -0.27
PCDHGA4-202ENST00000612927 PODXLO00592 558 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 RARGP13631 454 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 ALDH3A1P30838 453 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 GJC1P36383 396 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 SGO2Q562F6 1265 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 EXOC3L1Q86VI1 746 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 AGGF1Q8N302 714 aaeCLIP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 DRAXINQ8NBI3 349 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 CFAP61Q8NHU2 1237 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 SH3TC2Q8TF17 1288 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 TEKT4Q8WW24 435 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 CKAP2Q8WWK9 683 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 MRPL4Q9BYD3 311 aaKnown RBP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 LRMDAQ9H2I8 198 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 CHST7Q9NS84 486 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 KLHL14Q9P2G3 628 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 PRKCBP05771 671 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 EFNA5P52803 228 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 CENPCQ03188 943 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 GJC2Q5T442 439 aaPredicted RBP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 TRIM68Q6AZZ1 485 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 MON1BQ7L1V2 547 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 CCDC25Q86WR0 208 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 BRSK2Q8IWQ3 736 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 ENDOVQ8N8Q3 282 aaKnown RBP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 FAM81BQ96LP2 452 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 ACO2Q99798 780 aaKnown RBP13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 ZNF408Q9H9D4 720 aa13.33□□□□□ -0.28
PCDHGA4-202ENST00000612927 TOM1L1O75674 476 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 ECEL1O95672 775 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 CYP1A1P04798 512 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 GNA15P30679 374 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 PCK1P35558 622 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 TSNAXIP1Q2TAA8 658 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 RHPN2Q8IUC4 686 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 RBBP8NLQ8NC74 664 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 SHCBP1Q8NEM2 672 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 SLC10A4Q96EP9 437 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 TMEM237Q96Q45 408 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 TCHPQ9BT92 498 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 ETNK1Q9HBU6 452 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 TMEM120BA0PK00 339 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 GLTPD2A6NH11 291 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 POTEJP0CG39 1038 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 KRT17Q04695 432 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 KLC1Q07866 573 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 MXD4Q14582 209 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 TTLL4Q14679 1199 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 TRIP13Q15645 432 aaPredicted RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 ZBTB8OSQ8IWT0 167 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 SERPINB12Q96P63 405 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 RPL26L1Q9UNX3 145 aaKnown RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
PCDHGA4-202ENST00000612927 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 THAP12O43422 761 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 GAS2O43903 313 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 PEX11AO75192 247 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 TPBGLP0DKB5 382 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 CLCN3P51790 818 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 RAD23BP54727 409 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 NOMO3P69849 1222 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 NCOA4Q13772 614 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 MAPK6Q16659 721 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 TRMT10CQ7L0Y3 403 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 ZNF677Q86XU0 584 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 C12orf50Q8NA57 414 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 INPP5DQ92835 1189 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 UTP4Q969X6 686 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 DDX27Q96GQ7 796 aaKnown RBP13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 NLRP4Q96MN2 994 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 VCXQ9H320 206 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 KLHL11Q9NVR0 708 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 NKX1-2Q9UD57 310 aaPredicted RBP13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 TRIM33Q9UPN9 1127 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 USTQ9Y2C2 406 aa13.31□□□□□ -0.28
PCDHGA4-202ENST00000612927 RPS6KL1Q9Y6S9 549 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms