RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RFX6Q8HWS3 928 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 GMLQ99445 158 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 TRIM56Q9BRZ2 755 aaKnown RBP14.78□□□□□ -0.04
COL6A1-207ENST00000612273 NTPCRQ9BSD7 190 aaKnown RBP14.78□□□□□ -0.04
COL6A1-207ENST00000612273 MYOZ2Q9NPC6 264 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 ZFP69BQ9UJL9 534 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 USH1CQ9Y6N9 552 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 TMEM191CA6NGB0 347 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 TMEM191BP0C7N4 346 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 CCND1P24385 295 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 IL1R2P27930 398 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 RFWD3Q6PCD5 774 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 NIPA1Q7RTP0 329 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 CCDC125Q86Z20 511 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 UNC45BQ8IWX7 931 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 ALLCQ8N6M5 410 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 FAM13CQ8NE31 585 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 PTPRN2Q92932 1015 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 PAFAH2Q99487 392 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 EBF2Q9HAK2 575 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 LTBP1Q14766 1721 aa14.78□□□□□ -0.04
COL6A1-207ENST00000612273 MMP8P22894 467 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 NBPF20Q3BBV1 942 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 SH3PXD2AQ5TCZ1 1133 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 SCYL3Q8IZE3 742 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 TRAPPC12Q8WVT3 735 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 RBM41Q96IZ5 413 aaKnown RBP14.77□□□□□ -0.04
COL6A1-207ENST00000612273 FAM111AQ96PZ2 611 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 ZNF302Q9NR11 478 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 LGALS13Q9UHV8 139 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 STAM2O75886 525 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 STBD1O95210 358 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 VCPP55072 806 aaKnown RBP14.77□□□□□ -0.04
COL6A1-207ENST00000612273 PTP4A2Q12974 167 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 TFDP3Q5H9I0 405 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 DENND1BQ6P3S1 775 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 SCYL2Q6P3W7 929 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 C15orf39Q6ZRI6 1047 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 CFAP36Q96G28 342 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 NLRP4Q96MN2 994 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 YIPF3Q9GZM5 350 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 TXLNGQ9NUQ3 528 aa14.77□□□□□ -0.04
COL6A1-207ENST00000612273 hCG_1818297A0A087WSY0 165 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 ENO4A6NNW6 628 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 GCKP35557 465 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 PSMC1P62191 440 aaKnown RBP14.77□□□□□ -0.05
COL6A1-207ENST00000612273 C1orf228Q6PIY5 440 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 ASRGL1Q7L266 308 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 TTC7BQ86TV6 843 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 KCTD6Q8NC69 237 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 SLC13A1Q9BZW2 595 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 ZNF395Q9H8N7 513 aaPredicted RBP14.77□□□□□ -0.05
COL6A1-207ENST00000612273 RNF19AQ9NV58 838 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 IKBKGQ9Y6K9 419 aa14.77□□□□□ -0.05
COL6A1-207ENST00000612273 LY75O60449 1722 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 CLUHO75153 1309 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 KIF13BQ9NQT8 1826 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 EDF1O60869 148 aaKnown RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 ITGBL1O95965 494 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 KRT3P12035 628 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 DPEP1P16444 411 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 EN1Q05925 392 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 TMEM132BQ14DG7 1078 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 XKR3Q5GH77 459 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 KIAA0319LQ8IZA0 1049 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 RNF149Q8NC42 400 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 TMEM35BQ8NCS4 154 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 PRPF31Q8WWY3 499 aaKnown RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 TIPINQ9BVW5 301 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 PSMC3IPQ9P2W1 217 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 HEY1Q9Y5J3 304 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 LTBP4Q8N2S1 1624 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 INO80B-WBP1J3KQ70 363 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 PMM2O15305 246 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 TMEM63AO94886 807 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 T-ENOLP0DO92 83 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 SNRPFP62306 86 aaKnown RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 RIPK1Q13546 671 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 CCDC6Q16204 474 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 RNASEH2BQ5TBB1 312 aaKnown RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 RNF43Q68DV7 783 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 ZNF677Q86XU0 584 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 IGDCC3Q8IVU1 814 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 NETO2Q8NC67 525 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 UBA3Q8TBC4 463 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 MAGEC3Q8TD91 643 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 LPAR1Q92633 364 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 TRIM6Q9C030 488 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 INO80BQ9C086 356 aaPredicted RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 GPATCH2LQ9NWQ4 482 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 DONSONQ9NYP3 566 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 NRXN2Q9P2S2 1712 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 HEY2Q9UBP5 337 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 XPO7Q9UIA9 1087 aaKnown RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 DNAH12Q6ZR08 3092 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 RPL22P35268 128 aaKnown RBP14.76□□□□□ -0.05
COL6A1-207ENST00000612273 WDR78Q5VTH9 848 aa14.76□□□□□ -0.05
COL6A1-207ENST00000612273 PAXIP1Q6ZW49 1069 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms