RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CTAGE4Q8IX94 777 aa13.04□□□□□ -0.32
CBWD1-220ENST00000612045 CRYBG2Q8N1P7 616 aa13.04□□□□□ -0.32
CBWD1-220ENST00000612045 APBB2Q92870 758 aa13.04□□□□□ -0.32
CBWD1-220ENST00000612045 DDX27Q96GQ7 796 aaKnown RBP13.04□□□□□ -0.32
CBWD1-220ENST00000612045 TRIM7Q9C029 511 aa13.04□□□□□ -0.32
CBWD1-220ENST00000612045 CES2O00748 559 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 COMTP21964 271 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 AARSP49588 968 aaKnown RBP eCLIP13.03□□□□□ -0.32
CBWD1-220ENST00000612045 CCL23P55773 120 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 PDCLQ13371 301 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 ERCC6LQ2NKX8 1250 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 GOLGA7BQ2TAP0 167 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 CYP4A22Q5TCH4 519 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 WSCD1Q658N2 575 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 ARHGAP17Q68EM7 881 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 RSRC2Q7L4I2 434 aaKnown RBP13.03□□□□□ -0.32
CBWD1-220ENST00000612045 ANKLE1Q8NAG6 615 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 UBA3Q8TBC4 463 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 GOLGA1Q92805 767 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 SCLYQ96I15 445 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 PBKQ96KB5 322 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 UROC1Q96N76 676 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 DNAI2Q9GZS0 605 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 WNT8AQ9H1J5 351 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 FAM49BQ9NUQ9 324 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 TMEM161AQ9NX61 479 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 RNF14Q9UBS8 474 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 STRIP2Q9ULQ0 834 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
CBWD1-220ENST00000612045 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 MYO1FO00160 1098 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 GABRDO14764 452 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 DDX3YO15523 660 aaKnown RBP13.02□□□□□ -0.32
CBWD1-220ENST00000612045 B3GAT3O94766 335 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 PARNO95453 639 aaKnown RBP13.02□□□□□ -0.32
CBWD1-220ENST00000612045 CXCL10P02778 98 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 CFAP221Q4G0U5 840 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 NOMO2Q5JPE7 1267 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 DNAJC24Q6P3W2 148 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 TMEM86AQ8N2M4 240 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 MSANTD4Q8NCY6 345 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 C3orf20Q8ND61 904 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 URGCPQ8TCY9 931 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 UBXN4Q92575 508 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 MS4A14Q96JA4 679 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 TNIP3Q96KP6 325 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 CPXM1Q96SM3 734 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 LPIN3Q9BQK8 851 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.32
CBWD1-220ENST00000612045 ELAC1Q9H777 363 aaKnown RBP13.02□□□□□ -0.32
CBWD1-220ENST00000612045 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 SCN5AQ14524 2016 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 MIF4GDA9UHW6 222 aaKnown RBP13.02□□□□□ -0.33
CBWD1-220ENST00000612045 GJB6O95452 261 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 PFKMP08237 780 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 CYP2C18P33260 490 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 GABRB2P47870 512 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 CTCFP49711 727 aaPredicted RBP13.02□□□□□ -0.33
CBWD1-220ENST00000612045 TCTN1Q2MV58 587 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 TIGD5Q53EQ6 642 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 CCDC181Q5TID7 509 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 ZNF572Q7Z3I7 529 aaPredicted RBP13.02□□□□□ -0.33
CBWD1-220ENST00000612045 TTC30AQ86WT1 665 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 B3GALNT2Q8NCR0 500 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 FEZF2Q8TBJ5 459 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 CD101Q93033 1021 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 C18orf8Q96DM3 657 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 SYNCQ9H7C4 482 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 SMARCAL1Q9NZC9 954 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 EHD2Q9NZN4 543 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 KANSL3Q9P2N6 904 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 TJP2Q9UDY2 1190 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 TBX21Q9UL17 535 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 ATP11BQ9Y2G3 1177 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 PCDHB7Q9Y5E2 793 aa13.02□□□□□ -0.33
CBWD1-220ENST00000612045 KIAA0100Q14667 2235 aaKnown RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 SPOPO43791 374 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 DDHD2O94830 711 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 ERBB2P04626 1255 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 ODC1P11926 461 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 CCDC130P13994 396 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 PAX3P23760 479 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 PAFAH1B1P43034 410 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 LHX1P48742 406 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 GSCP56915 257 aaPredicted RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 PSMC1P62191 440 aaKnown RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 RPL7AP62424 266 aaKnown RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 DSC1Q08554 894 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 ELF2Q15723 593 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 PAN2Q504Q3 1202 aaKnown RBP13.01□□□□□ -0.33
CBWD1-220ENST00000612045 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 TEX35Q5T0J7 233 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
CBWD1-220ENST00000612045 CHRDL2Q6WN34 429 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms