RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 EXT2Q93063 718 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 TARS2Q9BW92 718 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 MRPL46Q9H2W6 279 aaKnown RBP11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 LTN1O94822 1766 aa11.4□□□□□ -0.58
CDC42EP3-206ENST00000611976 SMIM22K7EJ46 135 aa11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 POLBP06746 335 aa11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 OTUD4Q01804 1114 aaKnown RBP11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 IER5Q5VY09 327 aa11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 SV2AQ7L0J3 742 aa11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMX2Q9Y320 296 aa11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 ACTL7BQ9Y614 415 aa11.4□□□□□ -0.59
CDC42EP3-206ENST00000611976 C19orf81C9J6K1 198 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 UBTFL6P0CB48 400 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CPA2P48052 419 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 VCPP55072 806 aaKnown RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 POU5F1BQ06416 359 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 PDCD2Q16342 344 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 DUPD1Q68J44 220 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 KCTD10Q9H3F6 313 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 PNMA3Q9UL41 463 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ASTN1O14525 1302 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 SNX3O60493 162 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 GLRA3O75311 464 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 DRD4P21917 467 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 NAMPTP43490 491 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 IL1RL1Q01638 556 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 NME3Q13232 169 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CNGA2Q16280 664 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ABRAQ8N0Z2 381 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 LRRC43Q8N309 656 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 LNX1Q8TBB1 728 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ZBTB18Q99592 522 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 NT5C1AQ9BXI3 368 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CCDC134Q9H6E4 229 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 MYL2P10916 166 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 LCP1P13796 627 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 SULT1E1P49888 294 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 HMGCS2P54868 508 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ATF7IP2Q5U623 682 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 SLC26A11Q86WA9 606 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 SCUBE1Q8IWY4 988 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 AGR3Q8TD06 166 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CKAP2Q8WWK9 683 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 INPP5DQ92835 1189 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ACSF2Q96CM8 615 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 TRIM62Q9BVG3 475 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 TTYH3Q9C0H2 523 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 AGO4Q9HCK5 861 aaKnown RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 GAS2O43903 313 aaKnown RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 MGEA5O60502 916 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 VIL1P09327 827 aaKnown RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ERFP50548 548 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ALDH5A1P51649 535 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 MTFR1Q15390 333 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 HYIQ5T013 277 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 IRF2BP2Q7Z5L9 587 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 CCNJLQ8IV13 435 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ATXN7L3BQ96GX2 97 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 MED15Q96RN5 788 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 LBHD1Q9BQE6 289 aaPredicted RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 MRPL1Q9BYD6 325 aaKnown RBP11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 KCNQ5Q9NR82 932 aa11.39□□□□□ -0.59
CDC42EP3-206ENST00000611976 ATP9BO43861 1147 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 IL10P22301 178 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 FDFT1P37268 417 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 HSPA13P48723 471 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 RGS7P49802 495 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 CASP5P51878 434 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 SLC12A1Q13621 1099 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 RRP1BQ14684 758 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 BMT2Q1RMZ1 405 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 LRRC8EQ6NSJ5 796 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 NOP9Q86U38 636 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 ZNF668Q96K58 619 aaPredicted RBP11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 POP1Q99575 1024 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 ING2Q9H160 280 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 PIM2Q9P1W9 311 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 TAGLN3Q9UI15 199 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 ADCY3O60266 1144 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 CNTFP26441 200 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 DDR1Q08345 913 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 AUHQ13825 339 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 PDK1Q15118 436 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 PDK2Q15119 407 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 MROH9Q5TGP6 573 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 GRAMD4Q6IC98 578 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 STYK1Q6J9G0 422 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 NIPA1Q7RTP0 329 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 ZCCHC9Q8N567 271 aaKnown RBP11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 EPAS1Q99814 870 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 NDUFA13Q9P0J0 144 aa11.38□□□□□ -0.59
CDC42EP3-206ENST00000611976 BAZ2BQ9UIF8 2168 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms