RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 ODC1P11926 461 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 RECQLP46063 649 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 MAPK7Q13164 816 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF235Q14590 738 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 SIAH1Q8IUQ4 282 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 EPS8L1Q8TE68 723 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 FAM172AQ8WUF8 416 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 RAPGEF5Q92565 580 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 BHMTQ93088 406 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZBTB10Q96DT7 871 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZIM3Q96PE6 472 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 GAD1Q99259 594 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ISCUQ9H1K1 167 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 BCAS3Q9H6U6 928 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ABCF3Q9NUQ8 709 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF214Q9UL59 606 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 KIAA1257Q9ULG3 409 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 TPX2Q9ULW0 747 aaKnown RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 NID2Q14112 1375 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 SCN11AQ9UI33 1791 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 RCCD1A6NED2 376 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PQBP1O60828 265 aaKnown RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 MAP3K7CLP57077 242 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 MAP2K5Q13163 448 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 BEND6Q5SZJ8 279 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 CHADLQ6NUI6 762 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF449Q6P9G9 518 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 SPATS2Q86XZ4 545 aaKnown RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 GPATCH11Q8N954 259 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 CFAP61Q8NHU2 1237 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 KLHL29Q96CT2 875 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 RMDN1Q96DB5 314 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PPP1R12CQ9BZL4 782 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 CYP3A43Q9HB55 503 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 XPO7Q9UIA9 1087 aaKnown RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 BARX2Q9UMQ3 279 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 TRIM17Q9Y577 477 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ANGPTL3Q9Y5C1 460 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 SNED1Q8TER0 1413 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PHRF1Q9P1Y6 1649 aaKnown RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ATRNL1Q5VV63 1379 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 GOLGA8CPA6NN73 597 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF862O60290 1169 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 KCNA2P16389 499 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PRLRP16471 622 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PCK1P35558 622 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PRAMEP78395 509 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 POU5F1BQ06416 359 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 SLC29A2Q14542 456 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 TAF1BQ53T94 588 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 MDH1BQ5I0G3 518 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 RNF219Q5W0B1 726 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 SH3TC2Q8TF17 1288 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 UBE2Q2Q8WVN8 375 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 CASKIN2Q8WXE0 1202 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 BAP1Q92560 729 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 TMEM169Q96HH4 297 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 TTC1Q99614 292 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF518BQ9C0D4 1074 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 CDT1Q9H211 546 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 TMEM134Q9H6X4 195 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 ZC3H7BQ9UGR2 993 aaKnown RBP7.62□□□□□ -1.19
CSDE1-218ENST00000610726 PPME1Q9Y570 386 aa7.62□□□□□ -1.19
CSDE1-218ENST00000610726 MYH2Q9UKX2 1941 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SLC15A5A6NIM6 579 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 NFICP08651 508 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 PAMP19021 973 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 MX2P20592 715 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 TYK2P29597 1187 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ATICP31939 592 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 BCAT1P54687 386 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SLC12A1Q13621 1099 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 C10orf120Q5SQS8 335 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 FBXO25Q8TCJ0 367 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SHISA4Q96DD7 197 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 GMLQ99445 158 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 KLF6Q99612 283 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 GANQ9H2C0 597 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 RNPEPQ9H4A4 650 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 KRT82Q9NSB4 513 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 DDX43Q9NXZ2 648 aaKnown RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 DCTN4Q9UJW0 460 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SLC8A2Q9UPR5 921 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 KDM3BQ7LBC6 1761 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 A0A0A6YYK5 440 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 DCDC2CA8MYV0 355 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 DPYSL4O14531 572 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 KPNA6O60684 536 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 GLI1P08151 1106 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 IRF1P10914 325 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 INHBEP58166 350 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 MMEL1Q495T6 779 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SYDE1Q6ZW31 735 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 PLPPR4Q7Z2D5 763 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 RAB44Q7Z6P3 723 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-218ENST00000610726 ZNF410Q86VK4 478 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 RNF135Q8IUD6 432 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SLC9A9Q8IVB4 645 aa7.61□□□□□ -1.19
CSDE1-218ENST00000610726 SCUBE3Q8IX30 993 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms