RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 TBCAO75347 108 aaKnown RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 TCF3P15923 654 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 RPA1P27694 616 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.54□□□□□ -0.4
TP53-220ENST00000610623 Q4G0T1 1027 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 AAGABQ6PD74 315 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 MOXD1Q6UVY6 613 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 LRRC6Q86X45 466 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 SIAH1Q8IUQ4 282 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 SCUBE1Q8IWY4 988 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 PRMT6Q96LA8 375 aaPredicted RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 MANSC1Q9H8J5 431 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 F5H6K3 240 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 VIL1P09327 827 aaKnown RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 DLGAP5Q15398 846 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 PDSS2Q86YH6 399 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 RNF168Q8IYW5 571 aaPredicted RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 OR6Y1Q8NGX8 325 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 HAUS1Q96CS2 278 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 TSSK1BQ9BXA7 367 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 AMNQ9BXJ7 453 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 RANBP17Q9H2T7 1088 aaKnown RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 RHBDL2Q9NX52 303 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 PSMC3IPQ9P2W1 217 aaPredicted RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 PCDHA1Q9Y5I3 950 aa12.54□□□□□ -0.4
TP53-220ENST00000610623 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
TP53-220ENST00000610623 BUD23O43709 281 aaKnown RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 AP1G1O43747 822 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 TM7SF2O76062 418 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 PLS3P13797 630 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 KRT4P19013 534 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 SLC1A1P43005 524 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 BAG6P46379 1132 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 VPS41P49754 854 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 ARHGAP4P98171 946 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 CCNG2Q16589 344 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 MAP3K21Q5TCX8 1036 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 SYDE2Q5VT97 1194 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 FKBP1CQ5VVH2 108 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 PCNX4Q63HM2 1172 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 POTEAQ6S8J7 498 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 B3GNT6Q6ZMB0 384 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 RASSF3Q86WH2 238 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 FAM151AQ8WW52 585 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 ZNF653Q96CK0 615 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 BTBD6Q96KE9 485 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 TMEM120AQ9BXJ8 343 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 EBF3Q9H4W6 596 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 ALG2Q9H553 416 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 KCNK13Q9HB14 408 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 SAYSD1Q9NPB0 183 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 TIMMDC1Q9NPL8 285 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 FETUBQ9UGM5 382 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 CHMP2BQ9UQN3 213 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 CYP3A7-CYP3A51PA0A087WV96 503 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 FAM170AA1A519 330 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 B2RBV5 119 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 GDF11O95390 407 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 NDUFB10O96000 172 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 IL1BP01584 269 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 HARSP12081 509 aaKnown RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 BMP3P12645 472 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 UQCRBP14927 111 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 CYP3A7P24462 503 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 PSMC6P62333 389 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 CETN1Q12798 172 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 OVGP1Q12889 678 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 DNAL1Q4LDG9 190 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 RIPOR1Q6ZS17 1223 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 CPNE8Q86YQ8 564 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 GFM2Q969S9 779 aaKnown RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 OXNAD1Q96HP4 312 aaPredicted RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 AGBL1Q96MI9 1066 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 PANX3Q96QZ0 392 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 PCDHB18PQ96TA0 734 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 GMLQ99445 158 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 RUSC1Q9BVN2 902 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.53□□□□□ -0.4
TP53-220ENST00000610623 UBE2TQ9NPD8 197 aaPredicted RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 FBXO6Q9NRD1 293 aaPredicted RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 DMAC2Q9NW81 257 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
TP53-220ENST00000610623 ZNF232Q9UNY5 417 aa12.53□□□□□ -0.4
TP53-220ENST00000610623 A0A0J9YVX5 310 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms