RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 RAB6CQ53S08 254 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 IGDCC3Q8IVU1 814 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 UNC45BQ8IWX7 931 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 C12orf56Q8IXR9 622 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 VTI1AQ96AJ9 217 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 SYT15Q9BQS2 421 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 RAB6CQ9H0N0 254 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 LRMDAQ9H2I8 198 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 CAPN9O14815 690 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 PSMA2P25787 234 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 RFC1P35251 1148 aaPredicted RBP21.45■■□□□ 1.02
SSBP3-216ENST00000610401 HSD17B4P51659 736 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 YARSP54577 528 aaKnown RBP21.45■■□□□ 1.02
SSBP3-216ENST00000610401 MMRN1Q13201 1228 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 WDR60Q8WVS4 1066 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 CADM1Q9BY67 442 aaKnown RBP21.45■■□□□ 1.02
SSBP3-216ENST00000610401 PIH1D1Q9NWS0 290 aaKnown RBP21.45■■□□□ 1.02
SSBP3-216ENST00000610401 ZFATQ9P243 1243 aa21.45■■□□□ 1.02
SSBP3-216ENST00000610401 BAG2O95816 211 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 EDN1P05305 212 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 SRGAP2CP0DJJ0 459 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 TROVE2P10155 538 aaKnown RBP eCLIP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 PYGBP11216 843 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 CDH8P55286 799 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 MYL6P60660 151 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 BMPR2Q13873 1038 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 SYDE1Q6ZW31 735 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 FAM160B2Q86V87 743 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 KATNAL2Q8IYT4 538 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 ALLCQ8N6M5 410 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 FBXO27Q8NI29 283 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 JOSD2Q8TAC2 188 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 DEPTORQ8TB45 409 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 DNAJC9Q8WXX5 260 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 LPXNO60711 386 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 ENO1P06733 434 aaKnown RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 ZACNQ401N2 412 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 RFX6Q8HWS3 928 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 BBOF1Q8ND07 529 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 HIPK4Q8NE63 616 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 ARMC2Q8NEN0 867 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 CNKSR1Q969H4 720 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 GRAMD1AQ96CP6 724 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 MOV10L1Q9BXT6 1211 aaKnown RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 MANSC1Q9H8J5 431 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 KIF13BQ9NQT8 1826 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 PSTPIP1O43586 416 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 MT-ND3P03897 115 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 CYP1A1P04798 512 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 UBTFL6P0CB48 400 aaPredicted RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 GEMIN4P57678 1058 aaKnown RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 PDCD7Q8N8D1 485 aaKnown RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 NETO2Q8NC67 525 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 XPO7Q9UIA9 1087 aaKnown RBP21.44■■□□□ 1.02
SSBP3-216ENST00000610401 WASF2Q9Y6W5 498 aa21.44■■□□□ 1.02
SSBP3-216ENST00000610401 HAUS5O94927 633 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 NR3C2P08235 984 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 ZCCHC18P0CG32 403 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 ATP4AP20648 1035 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 ACO1P21399 889 aaKnown RBP21.43■■□□□ 1.02
SSBP3-216ENST00000610401 RASSF2P50749 326 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 ARFIP2P53365 341 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 SLC27A3Q5K4L6 730 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 THNSL1Q8IYQ7 743 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 AGGF1Q8N302 714 aaeCLIP21.43■■□□□ 1.022e-6■□□□□ 9.7
SSBP3-216ENST00000610401 AKT1S1Q96B36 256 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 TSSK1BQ9BXA7 367 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 PXMP2Q9NR77 195 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 CYB561D2O14569 222 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 TMEM63AO94886 807 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 IL1R2P27930 398 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 POLE2P56282 527 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 TCEAL1Q15170 157 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 RNASEH2BQ5TBB1 312 aaKnown RBP21.43■■□□□ 1.02
SSBP3-216ENST00000610401 C1orf228Q6PIY5 440 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 RINLQ6ZS11 566 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 ZCCHC23Q6ZST2 131 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 PPM1NQ8N819 430 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 TMEM120AQ9BXJ8 343 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 AVENQ9NQS1 362 aaPredicted RBP21.43■■□□□ 1.02
SSBP3-216ENST00000610401 NMRK1Q9NWW6 199 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 EURLQ9NYK6 297 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 KANSL3Q9P2N6 904 aa21.43■■□□□ 1.02
SSBP3-216ENST00000610401 EGFRP00533 1210 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 C4BPAP04003 597 aaKnown RBP21.42■■□□□ 1.02
SSBP3-216ENST00000610401 MYL2P10916 166 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 FAAP100Q0VG06 881 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 FSTL1Q12841 308 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 THOC5Q13769 683 aaKnown RBP21.42■■□□□ 1.02
SSBP3-216ENST00000610401 BLMHQ13867 455 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 SH3PXD2AQ5TCZ1 1133 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 TMC2Q8TDI7 906 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 ASAP3Q8TDY4 903 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 FAM81BQ96LP2 452 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 FAM161BQ96MY7 647 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 TTC1Q99614 292 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 RNF146Q9NTX7 359 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 RABGEF1Q9UJ41 708 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 NR2E3Q9Y5X4 410 aa21.42■■□□□ 1.02
SSBP3-216ENST00000610401 H3BRJ5 948 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms