RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 NXF1Q9UBU9 619 aaKnown RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 MRPS23Q9Y3D9 190 aaKnown RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
CD9-212ENST00000610354 PCDHB5Q9Y5E4 795 aa13.65□□□□□ -0.22
CD9-212ENST00000610354 NARSO43776 548 aaKnown RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 FAM163BP0C2L3 166 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 CYP2F1P24903 491 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 PSMC1P62191 440 aaKnown RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 FKBP3Q00688 224 aaKnown RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 TSPY1Q01534 308 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SMARCB1Q12824 385 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 ZNF699Q32M78 642 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 MGAT5BQ3V5L5 792 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SDHAF4Q5VUM1 108 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 PARM1Q6UWI2 310 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 TRIM67Q6ZTA4 783 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 DNAJB7Q7Z6W7 309 aaPredicted RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 STKLD1Q8NE28 680 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 GPR152Q8TDT2 470 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 NELFBQ8WX92 580 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SEMA4DQ92854 862 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 FGF14Q92915 247 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 MCRS1Q96EZ8 462 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 ASIC4Q96FT7 647 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 MED15Q96RN5 788 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 SYT15Q9BQS2 421 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 PI4K2AQ9BTU6 479 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 C1QTNF1Q9BXJ1 281 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 GTPBP4Q9BZE4 634 aaKnown RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 DPEP3Q9H4B8 488 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 CLSTN2Q9H4D0 955 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.64□□□□□ -0.23
CD9-212ENST00000610354 SORCS3Q9UPU3 1222 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 OBSL1O75147 1896 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 PSMA7O14818 248 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 MYL4P12829 197 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 KRT13P13646 458 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 PCSK1P29120 753 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
CD9-212ENST00000610354 ALDH1A3P47895 512 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 EPHB3P54753 998 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 STX17P56962 302 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 TNNC1P63316 161 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 ZNF667Q5HYK9 610 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SLC44A3Q8N4M1 653 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SHKBP1Q8TBC3 707 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 GIPC2Q8TF65 315 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 PSMG2Q969U7 264 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 ZSWIM3Q96MP5 696 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 TSG101Q99816 390 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 MMRN2Q9H8L6 949 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 IL21Q9HBE4 155 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 IGSF9Q9P2J2 1179 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 CDH9Q9ULB4 789 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 CTNND2Q9UQB3 1225 aa13.64□□□□□ -0.23
CD9-212ENST00000610354 SLC16A3O15427 465 aaKnown RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 MICAL2O94851 1124 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 EPB41P11171 864 aaKnown RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 HMGA1P17096 107 aaKnown RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 FCARP24071 287 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 ASPAP45381 313 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 SIGLEC14Q08ET2 396 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 PLD1Q13393 1074 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 TDGQ13569 410 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 MTMR3Q13615 1198 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 TEAD2Q15562 447 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 NFE2Q16621 373 aaPredicted RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 DDR2Q16832 855 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 SGSM1Q2NKQ1 1148 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 TMEM31Q5JXX7 168 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 IQCEQ6IPM2 695 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 GAREM2Q75VX8 874 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 ELMOD1Q8N336 334 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 OR6B3Q8NGW1 331 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 GPT2Q8TD30 523 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 MYLPFQ96A32 169 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 PLA2G2FQ9BZM2 168 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 SNX25Q9H3E2 840 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 TMEM8AQ9HCN3 771 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 ASAH2Q9NR71 780 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 TMEM30AQ9NV96 361 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 ASB3Q9Y575 518 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 ZFP37Q9Y6Q3 630 aaPredicted RBP13.63□□□□□ -0.23
CD9-212ENST00000610354 NUMBLQ9Y6R0 609 aa13.63□□□□□ -0.23
CD9-212ENST00000610354 NCANO14594 1321 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 ZNF638Q14966 1978 aaKnown RBP13.62□□□□□ -0.23
CD9-212ENST00000610354 TMEM221A6NGB7 291 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 M0R296 226 aa13.62□□□□□ -0.23
CD9-212ENST00000610354 ZNF197O14709 1029 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms