RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 RASA4BC9J798 803 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 INO80B-WBP1J3KQ70 363 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 RASA4O43374 803 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 ERN1O75460 977 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 IL18RAPO95256 599 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 GPANK1O95872 356 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 ERBB2P04626 1255 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 LAG3P18627 525 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 HTR3AP46098 478 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 STT3AP46977 705 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 UCP3P55916 312 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 RPS16P62249 146 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 TCF15Q12870 199 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 DAG1Q14118 895 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 TAPT1Q6NXT6 567 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 PPP1R32Q7Z5V6 425 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 VRK3Q8IV63 474 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 MAPKAPK5Q8IW41 473 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 SLC15A4Q8N697 577 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 MSLNLQ96KJ4 702 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 RIPOR3Q96MK2 946 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 TRIB1Q96RU8 372 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 SPATA5L1Q9BVQ7 753 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 INO80BQ9C086 356 aaPredicted RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 AKIP1Q9NQ31 210 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 ADARB2Q9NS39 739 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 MRPS18AQ9NVS2 196 aaKnown RBP5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 RNF181Q9P0P0 153 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 XPR1Q9UBH6 696 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 HESX1Q9UBX0 185 aa5.24□□□□□ -1.57
SMCHD1-213ENST00000609587 A0A087WWL8 130 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 CCDC195A0A1B0GUA6 201 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 TMEM200CA6NKL6 621 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 F8W8V4 182 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 NCR1O76036 304 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 PARP1P09874 1014 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 ZNF37AP17032 561 aaPredicted RBP5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 ITGB6P18564 788 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 FDXRP22570 491 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 TNFSF4P23510 183 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 SERPINB3P29508 390 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 BMPR1AP36894 532 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 OCA2Q04671 838 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 BEAN1Q3B7T3 259 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 TIGD2Q4W5G0 525 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 LY6G5CQ5SRR4 150 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 SLC30A10Q6XR72 485 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 TOGARAM2Q6ZUX3 1019 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 MICU3Q86XE3 530 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 LIX1LQ8IVB5 337 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 CCDC33Q8N5R6 958 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 A1CFQ9NQ94 594 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 STARD7Q9NQZ5 370 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 ETAA1Q9NY74 926 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 FNIP2Q9P278 1114 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 MTO1Q9Y2Z2 717 aaKnown RBP5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 DAAM1Q9Y4D1 1078 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 FPGT-TNNI3KV9GXZ4 949 aa5.23□□□□□ -1.57
SMCHD1-213ENST00000609587 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 GRID2IPA4D2P6 1211 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MBD3L4A6NDZ8 208 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MBD3L3A6NE82 208 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 TMEM233B4DJY2 109 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 LDHAP00338 332 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 ELANEP08246 267 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 CHRM3P20309 590 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MORC3Q14149 939 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 LONRF3Q496Y0 759 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 DCAF12L1Q5VU92 463 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 PAPD7Q5XG87 772 aaKnown RBP5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 SPICE1Q8N0Z3 855 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 TMEM132CQ8N3T6 1108 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 OR2C3Q8N628 320 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 PSD4Q8NDX1 1056 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 PROKR1Q8TCW9 393 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 SGCZQ96LD1 299 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 SLC46A1Q96NT5 459 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MOGAT1Q96PD6 335 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MLST8Q9BVC4 326 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 BRIP1Q9BX63 1249 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 STK31Q9BXU1 1019 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 MS4A7Q9GZW8 240 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 RIOX1Q9H6W3 641 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 VSX1Q9NZR4 365 aaPredicted RBP5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 CTTNBP2NLQ9P2B4 639 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 TAGLN3Q9UI15 199 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 KCNE5Q9UJ90 142 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 DMTF1Q9Y222 760 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 NEU2Q9Y3R4 380 aa5.22□□□□□ -1.57
SMCHD1-213ENST00000609587 PYCARD-AS1I3L0S3 204 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 TOR1BO14657 336 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 NCK2O43639 380 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 RHOBTB3O94955 611 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 CFIP05156 583 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 HLA-DOAP06340 250 aa5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 XRCC6P12956 609 aaKnown RBP eCLIP5.21□□□□□ -1.58
SMCHD1-213ENST00000609587 KCNA2P16389 499 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms