RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ZNF560Q96MR9 790 aa14.41□□□□□ -0.1
POLR2J3-219ENST00000608621 PCIF1Q9H4Z3 704 aa14.41□□□□□ -0.1
POLR2J3-219ENST00000608621 C2orf42Q9NWW7 574 aa14.41□□□□□ -0.1
POLR2J3-219ENST00000608621 ZMYM5Q9UJ78 669 aa14.41□□□□□ -0.1
POLR2J3-219ENST00000608621 MAGED2Q9UNF1 606 aaPredicted RBP14.41□□□□□ -0.1
POLR2J3-219ENST00000608621 KIF26AQ9ULI4 1882 aaPredicted RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 HUS1O60921 280 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 PAPSS2O95340 614 aaPredicted RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 RETP07949 1114 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 CSH1P0DML2 217 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 CSH2P0DML3 217 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 GARTP22102 1010 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 HOXC13P31276 330 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 AVPR1AP37288 418 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 LMNB2Q03252 620 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 SRSF5Q13243 272 aaKnown RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 CCINQ13939 588 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 NFE2Q16621 373 aaPredicted RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 DDR2Q16832 855 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 TXNDC8Q6A555 127 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 LONP2Q86WA8 852 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 PDCL2Q8N4E4 241 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 STKLD1Q8NE28 680 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 NOC3LQ8WTT2 800 aaKnown RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 USP13Q92995 863 aaPredicted RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 FAM84AQ96KN4 292 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 FAM83CQ9BQN1 747 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 ACBD6Q9BR61 282 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 FGFBP2Q9BYJ0 223 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 PDE11AQ9HCR9 933 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 OLFML3Q9NRN5 406 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 PANK4Q9NVE7 773 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 DDX43Q9NXZ2 648 aaKnown RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 RBAKQ9NYW8 714 aaPredicted RBP14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 GTF3C4Q9UKN8 822 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 L1RE1Q9UN81 338 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 CCL26Q9Y258 94 aa14.4□□□□□ -0.1
POLR2J3-219ENST00000608621 A0A087X0B3 334 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 EXTL3O43909 919 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 PRPF6O94906 941 aaKnown RBP14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 KRT19P08727 400 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 ACAT1P24752 427 aaKnown RBP14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 CYP2F1P24903 491 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 DDX6P26196 483 aaKnown RBP eCLIP14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 CNR2P34972 360 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 STAT6P42226 847 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 BFSP1Q12934 665 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 RUNX3Q13761 415 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 SLC39A14Q15043 492 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 TRIM68Q6AZZ1 485 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 SYNPOQ8N3V7 929 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 CXorf38Q8TB03 319 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 MRPS31Q92665 395 aaKnown RBP14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 USP28Q96RU2 1077 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 CBWD1Q9BRT8 395 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 EBF3Q9H4W6 596 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 HPS4Q9NQG7 708 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 TDP1Q9NUW8 608 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 SNX9Q9Y5X1 595 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 ZNF638Q14966 1978 aaKnown RBP14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 DENND4CQ5VZ89 1909 aa14.39□□□□□ -0.11
POLR2J3-219ENST00000608621 DNAH14Q0VDD8 3507 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 FRMD3A2A2Y4 597 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 DCDC2BA2VCK2 349 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 OTOL1A6NHN0 477 aaPredicted RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 RPL10AP62906 217 aaKnown RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 RBP5P82980 135 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 MYL7Q01449 175 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 ALCAMQ13740 583 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 INTS6LQ5JSJ4 861 aaKnown RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 MON1AQ86VX9 555 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 TMEM86AQ8N2M4 240 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 PIAS4Q8N2W9 510 aaPredicted RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 GPD1LQ8N335 351 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 LRRC52Q8N7C0 313 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 PDILTQ8N807 584 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 LEO1Q8WVC0 666 aaPredicted RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 GDAP2Q9NXN4 497 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 ITGA11Q9UKX5 1188 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 CDV3Q9UKY7 258 aaKnown RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 ATG2BQ96BY7 2078 aa14.38□□□□□ -0.11
POLR2J3-219ENST00000608621 SOBPA7XYQ1 873 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 HCRTO43612 131 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 TMEM191BP0C7N4 346 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 HOXA6P31267 233 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 LHX1P48742 406 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 CCDC142Q17RM4 750 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 TMEM196Q5HYL7 178 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 LMBRD2Q68DH5 695 aaPredicted RBP14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 FSTL4Q6MZW2 842 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 CEP68Q76N32 757 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 WDR5BQ86VZ2 330 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 CCDC65Q8IXS2 484 aa14.37□□□□□ -0.11
POLR2J3-219ENST00000608621 RIN3Q8TB24 985 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms