RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 RFPL2O75678 378 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 PAPLNO95428 1278 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 SEC24AO95486 1093 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 POU2F2P09086 479 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
CTSA-219ENST00000607841 ALDH1A3P47895 512 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 INCA1Q0VD86 236 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 LRMPQ12912 555 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 CUL2Q13617 745 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 NCAPHQ15003 741 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 EXOC3L4Q17RC7 722 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 MGAT5BQ3V5L5 792 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 SPATA2LQ8IUW3 424 aaPredicted RBP15.21■□□□□ 0.03
CTSA-219ENST00000607841 ELMOD1Q8N336 334 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 ATAD1Q8NBU5 361 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 MYCBPAPQ8TBZ2 947 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 SMG7Q92540 1137 aaKnown RBP15.21■□□□□ 0.03
CTSA-219ENST00000607841 FUBP3Q96I24 572 aaKnown RBP eCLIP15.21■□□□□ 0.03
CTSA-219ENST00000607841 NT5C1AQ9BXI3 368 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 INTS2Q9H0H0 1204 aaKnown RBP15.21■□□□□ 0.03
CTSA-219ENST00000607841 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 ABCB6Q9NP58 842 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 ABI2Q9NYB9 513 aaPredicted RBP15.21■□□□□ 0.03
CTSA-219ENST00000607841 GCNT4Q9P109 453 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 INSL5Q9Y5Q6 135 aa15.21■□□□□ 0.03
CTSA-219ENST00000607841 ATG2AQ2TAZ0 1938 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 HCRTO43612 131 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 CD58P19256 250 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 NDST1P52848 882 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 PSMC1P62191 440 aaKnown RBP15.2■□□□□ 0.02
CTSA-219ENST00000607841 CBX2Q14781 532 aaPredicted RBP15.2■□□□□ 0.02
CTSA-219ENST00000607841 KRT31Q15323 416 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 MIIPQ5JXC2 388 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 FKBP15Q5T1M5 1219 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 IQCEQ6IPM2 695 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 DHX40Q8IX18 779 aaKnown RBP15.2■□□□□ 0.02
CTSA-219ENST00000607841 CRYBG2Q8N1P7 616 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 PPM1KQ8N3J5 372 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 LMO3Q8TAP4 145 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 SUSD6Q92537 303 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 PKMYT1Q99640 499 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
CTSA-219ENST00000607841 CISHQ9NSE2 258 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 TMLHEQ9NVH6 421 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 TAB2Q9NYJ8 693 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 LIMA1Q9UHB6 759 aaKnown RBP15.2■□□□□ 0.02
CTSA-219ENST00000607841 SLC27A5Q9Y2P5 690 aa15.2■□□□□ 0.02
CTSA-219ENST00000607841 USP15Q9Y4E8 981 aaPredicted RBP15.2■□□□□ 0.02
CTSA-219ENST00000607841 LRRC10BA6NIK2 292 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 CCL16O15467 120 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 ATP2C2O75185 946 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 CILPO75339 1184 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 VNN2O95498 520 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 HAPLN1P10915 354 aaPredicted RBP15.19■□□□□ 0.02
CTSA-219ENST00000607841 ZNF18P17022 549 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 EPHB3P54753 998 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 GCNT1Q02742 428 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 TWF1Q12792 350 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 SMAD2Q15796 467 aaKnown RBP15.19■□□□□ 0.02
CTSA-219ENST00000607841 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 ENOSF1Q7L5Y1 443 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 MYLPFQ96A32 169 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 JAKMIP2Q96AA8 810 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 ZNF707Q96C28 371 aaPredicted RBP15.19■□□□□ 0.02
CTSA-219ENST00000607841 PCED1BQ96HM7 432 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 ZNF512Q96ME7 567 aaPredicted RBP15.19■□□□□ 0.02
CTSA-219ENST00000607841 CRACR2AQ9BSW2 395 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 VPS16Q9H269 839 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 CRTAC1Q9NQ79 661 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 YIPF1Q9Y548 306 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
CTSA-219ENST00000607841 ATP8B3O60423 1300 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 A0A0C4DFX4 3053 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 PTPN2P17706 415 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 KCNQ1P51787 676 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 RPL10AP62906 217 aaKnown RBP15.18■□□□□ 0.02
CTSA-219ENST00000607841 VEPH1Q14D04 833 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 IQCB1Q15051 598 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 TJAP1Q5JTD0 557 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 TRIM65Q6PJ69 517 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 LRSAM1Q6UWE0 723 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 VSTM1Q6UX27 236 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 ITIH5Q86UX2 942 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 TMEM176AQ96HP8 235 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 ELOVL4Q9GZR5 314 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 CRISPLD1Q9H336 500 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 NME7Q9Y5B8 376 aa15.18■□□□□ 0.02
CTSA-219ENST00000607841 BMP1P13497 986 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 SLC9A1P19634 815 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 CYP2F1P24903 491 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 PON1P27169 355 aa15.17■□□□□ 0.02
CTSA-219ENST00000607841 MAGEA11P43364 429 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms