RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 PI4K2AQ9BTU6 479 aa17.72■□□□□ 0.43
LINC00240-203ENST00000606878 GPR88Q9GZN0 384 aa17.72■□□□□ 0.43
LINC00240-203ENST00000606878 DNAJC25Q9H1X3 360 aa17.72■□□□□ 0.43
LINC00240-203ENST00000606878 ABCB6Q9NP58 842 aa17.72■□□□□ 0.43
LINC00240-203ENST00000606878 NUMBLQ9Y6R0 609 aa17.72■□□□□ 0.43
LINC00240-203ENST00000606878 TECTAO75443 2155 aa17.72■□□□□ 0.43
LINC00240-203ENST00000606878 STX10O60499 249 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 GTF2H1P32780 548 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 GCLMP48507 274 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 MCCD1P59942 119 aaPredicted RBP17.71■□□□□ 0.43
LINC00240-203ENST00000606878 MORC3Q14149 939 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 PARM1Q6UWI2 310 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 C4orf50Q6ZRC1 276 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 GIPC2Q8TF65 315 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 FUBP3Q96I24 572 aaKnown RBP eCLIP17.71■□□□□ 0.43
LINC00240-203ENST00000606878 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
LINC00240-203ENST00000606878 PKMYT1Q99640 499 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 LRRC3Q9BY71 257 aa17.71■□□□□ 0.43
LINC00240-203ENST00000606878 MAGEC2Q9UBF1 373 aaPredicted RBP17.71■□□□□ 0.43
LINC00240-203ENST00000606878 A8MXQ7 604 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 PPP1R3GB7ZBB8 358 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 BIN1O00499 593 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 HCRTO43612 131 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 ATP2C2O75185 946 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 HLA-DRAP01903 254 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 CEBPBP17676 345 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 CYP2F1P24903 491 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 CCR2P41597 374 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 PMS1P54277 932 aaKnown RBP17.7■□□□□ 0.42
LINC00240-203ENST00000606878 PPP3CAQ08209 521 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 CAMK4Q16566 473 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 CFAP221Q4G0U5 840 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 CCDC150Q8NCX0 1101 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 ST13P5Q8NFI4 369 aaPredicted RBP17.7■□□□□ 0.42
LINC00240-203ENST00000606878 FGF14Q92915 247 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 ASIC4Q96FT7 647 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 LPIN3Q9BQK8 851 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 RPP25Q9BUL9 199 aaKnown RBP17.7■□□□□ 0.42
LINC00240-203ENST00000606878 IMPG2Q9BZV3 1241 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 SMOC2Q9H3U7 446 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 KIAA1468Q9P260 1216 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 DUSP12Q9UNI6 340 aa17.7■□□□□ 0.42
LINC00240-203ENST00000606878 SLC16A3O15427 465 aaKnown RBP17.69■□□□□ 0.42
LINC00240-203ENST00000606878 MOSPD3O75425 235 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 ASS1P00966 412 aaKnown RBP17.69■□□□□ 0.42
LINC00240-203ENST00000606878 TRIM49P0CI25 452 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 TRIM49CP0CI26 452 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 SRFP11831 508 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 CD44P16070 742 aaKnown RBP17.69■□□□□ 0.42
LINC00240-203ENST00000606878 GJA1P17302 382 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 PTPN1P18031 435 aaKnown RBP17.69■□□□□ 0.42
LINC00240-203ENST00000606878 ATF6P18850 670 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 PIK3CAP42336 1068 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 CDH8P55286 799 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 PSMC1P62191 440 aaKnown RBP17.69■□□□□ 0.42
LINC00240-203ENST00000606878 TEAD2Q15562 447 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 DDR2Q16832 855 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 KRT39Q6A163 491 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 KLHL10Q6JEL2 608 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 TRIML1Q8N9V2 468 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 MYCBPAPQ8TBZ2 947 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 ATXN3LQ9H3M9 355 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 MMRN2Q9H8L6 949 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 ZFP14Q9HCL3 533 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 TMEM8AQ9HCN3 771 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 CRTAC1Q9NQ79 661 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 FBXL21Q9UKT6 434 aa17.69■□□□□ 0.42
LINC00240-203ENST00000606878 DOCK8Q8NF50 2099 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 ZDBF2Q9HCK1 2354 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 A0A1W2PRU2 124 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 TRIM49BA6NDI0 452 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 NARSO43776 548 aaKnown RBP17.68■□□□□ 0.42
LINC00240-203ENST00000606878 CSH1P0DML2 217 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 CSH2P0DML3 217 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 COL9A1P20849 921 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 BMP6P22004 513 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 GABRR2P28476 465 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 MAGEA11P43364 429 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 CYP27A1Q02318 531 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 ARHGAP15Q53QZ3 475 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 FAM78AQ5JUQ0 283 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 VSTM1Q6UX27 236 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 TMC8Q8IU68 726 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 SCN4BQ8IWT1 228 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 SUGP1Q8IWZ8 645 aaKnown RBP17.68■□□□□ 0.42
LINC00240-203ENST00000606878 ZC3H3Q8IXZ2 948 aaKnown RBP17.68■□□□□ 0.42
LINC00240-203ENST00000606878 SHKBP1Q8TBC3 707 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 GPR152Q8TDT2 470 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 NELFBQ8WX92 580 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 SMARCD2Q92925 531 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 ZSWIM3Q96MP5 696 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 CEP63Q96MT8 703 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 SLITRK6Q9H5Y7 841 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 SMYD3Q9H7B4 428 aa17.68■□□□□ 0.42
LINC00240-203ENST00000606878 METTL14Q9HCE5 456 aaKnown RBP17.68■□□□□ 0.42
LINC00240-203ENST00000606878 WNT16Q9UBV4 365 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms