RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GNL1P36915 607 aaPredicted RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RPL34P49207 117 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 BCAT1P54687 386 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PPP2R5EQ16537 467 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CCDC181Q5TID7 509 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MMS22LQ6ZRQ5 1243 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ARCQ7LC44 396 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 RTN4RL1Q86UN2 441 aaPredicted RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 WDTC1Q8N5D0 677 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 OR6B3Q8NGW1 331 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 FEZF2Q8TBJ5 459 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 LINC01599Q8WXQ3 324 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 LPPQ93052 612 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MRPL9Q9BYD2 267 aaKnown RBP13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 OSBPL7Q9BZF2 842 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 HIPK3Q9H422 1215 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 HESX1Q9UBX0 185 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 IP6K2Q9UHH9 426 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ANAPC7Q9UJX3 599 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ALG6Q9Y672 507 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 VWA8A3KMH1 1905 aa13.01□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CARNS1A5YM72 827 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SIGLEC16A6NMB1 481 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 M0QYV0 167 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CYB561D2O14569 222 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DDX3YO15523 660 aaKnown RBP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PSTPIP1O43586 416 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PROSCO94903 275 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TFRCP02786 760 aaKnown RBP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PCSK1P29120 753 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CTCFP49711 727 aaPredicted RBP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CLCNKBP51801 687 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 FAAP100Q0VG06 881 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 BST2Q10589 180 aaKnown RBP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PDCLQ13371 301 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PIGHQ14442 188 aaPredicted RBP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NOMO2Q5JPE7 1267 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DNAJC24Q6P3W2 148 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 DNAAF5Q86Y56 855 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PASD1Q8IV76 773 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ANKRD52Q8NB46 1076 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 C18orf8Q96DM3 657 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MCRS1Q96EZ8 462 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SENP8Q96LD8 212 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 HSFY1Q96LI6 401 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 HNRNPABQ99729 332 aaKnown RBP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NCAPGQ9BPX3 1015 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MIOSQ9NXC5 875 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TSPAN16Q9UKR8 245 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TBX21Q9UL17 535 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CDH9Q9ULB4 789 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PCDHA3Q9Y5H8 950 aa13□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 COL4A4P53420 1690 aaPredicted RBP12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TMEM191CA6NGB0 347 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CCDC188H7C350 402 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PGRMC1O00264 195 aaKnown RBP12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ATMINO43313 823 aaPredicted RBP12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PQBP1O60828 265 aaKnown RBP12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CALCAP01258 141 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 COMTP21964 271 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ACADSBP45954 432 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SLC8A3P57103 927 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PLCB3Q01970 1234 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GPNMBQ14956 572 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PTPN20Q4JDL3 420 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 GLE1Q53GS7 698 aaKnown RBP12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 LRRC38Q5VT99 294 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TMEM110Q86TL2 294 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 METTL23Q86XA0 190 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 CRIPAKQ8N1N5 446 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MMGT1Q8N4V1 131 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 B3GALNT2Q8NCR0 500 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 COG1Q8WTW3 980 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SUSD3Q96L08 255 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.99□□□□□ -0.333e-6■□□□□ 10.2
NEDD8-MDP1-203ENST00000604306 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 TARSL2A2RTX5 802 aaKnown RBP12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ENPP3O14638 875 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 KCNK3O14649 394 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 NCK2O43639 380 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 SPOPO43791 374 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 EFCAB14O75071 495 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 ERBB2P04626 1255 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PFKMP08237 780 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 FGFR1P11362 822 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MCM3P25205 808 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PLA2G4AP47712 749 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 PEX5P50542 639 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MESDQ14696 234 aa12.98□□□□□ -0.33
NEDD8-MDP1-203ENST00000604306 MAPRE1Q15691 268 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms