RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 MIA3Q5JRA6 1907 aa19.43■□□□□ 0.7
CCDC12-208ENST00000603885 COL4A3Q01955 1670 aa19.43■□□□□ 0.7
CCDC12-208ENST00000603885 HEPACAM2A8MVW5 462 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 ZNF263O14978 683 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 NBL1P41271 181 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 NDUFA8P51970 172 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 BECN1Q14457 450 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 ZNF852Q6ZMS4 543 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 ARID3BQ8IVW6 561 aaPredicted RBP19.42■□□□□ 0.7
CCDC12-208ENST00000603885 YAF2Q8IY57 180 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 NELL2Q99435 816 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 PKMYT1Q99640 499 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 MKNK1Q9BUB5 465 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 BCO2Q9BYV7 579 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 LTB4R2Q9NPC1 389 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 TRPV5Q9NQA5 729 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 GTF3C4Q9UKN8 822 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 MRPS17Q9Y2R5 130 aaKnown RBP19.42■□□□□ 0.7
CCDC12-208ENST00000603885 USP34Q70CQ2 3546 aa19.42■□□□□ 0.7
CCDC12-208ENST00000603885 FAM237AA0A1B0GTK4 181 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 FAM170BA6NMN3 283 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 PROB1E7EW31 1015 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 DPYSL4O14531 572 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 LRRN2O75325 713 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 GLULP15104 373 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 CD72P21854 359 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 RPL10AP62906 217 aaKnown RBP19.41■□□□□ 0.7
CCDC12-208ENST00000603885 CYP4F8P98187 520 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 LIMS2Q7Z4I7 341 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 SPATA2LQ8IUW3 424 aaPredicted RBP19.41■□□□□ 0.7
CCDC12-208ENST00000603885 CCDC47Q96A33 483 aaKnown RBP19.41■□□□□ 0.7
CCDC12-208ENST00000603885 MMS19Q96T76 1030 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 TASP1Q9H6P5 420 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 IL21Q9HBE4 155 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 NCANO14594 1321 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 VPS13AQ96RL7 3174 aa19.41■□□□□ 0.7
CCDC12-208ENST00000603885 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 GFRA3O60609 400 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 RPN1P04843 607 aaKnown RBP19.4■□□□□ 0.7
CCDC12-208ENST00000603885 CSH1P0DML2 217 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 CSH2P0DML3 217 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 MAGEA9P43362 315 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 CFAP221Q4G0U5 840 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 C1orf210Q8IVY1 113 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 FSIP1Q8NA03 581 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 KBTBD7Q8WVZ9 684 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 RSPRY1Q96DX4 576 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 FUBP3Q96I24 572 aaKnown RBP eCLIP19.4■□□□□ 0.7
CCDC12-208ENST00000603885 SYT15Q9BQS2 421 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 ZMYM5Q9UJ78 669 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 CDH9Q9ULB4 789 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 MTF2Q9Y483 593 aaPredicted RBP19.4■□□□□ 0.7
CCDC12-208ENST00000603885 MYO15AQ9UKN7 3530 aa19.4■□□□□ 0.7
CCDC12-208ENST00000603885 NUP210Q8TEM1 1887 aaPredicted RBP19.39■□□□□ 0.7
CCDC12-208ENST00000603885 MAN2B1O00754 1011 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 NCAM2O15394 837 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 HCRTO43612 131 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 CST3P01034 146 aaPredicted RBP19.39■□□□□ 0.69
CCDC12-208ENST00000603885 HMGA1P17096 107 aaKnown RBP19.39■□□□□ 0.69
CCDC12-208ENST00000603885 WARSP23381 471 aaKnown RBP19.39■□□□□ 0.69
CCDC12-208ENST00000603885 CYP2F1P24903 491 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 TARSP26639 723 aaKnown RBP19.39■□□□□ 0.69
CCDC12-208ENST00000603885 WEE1P30291 646 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 GPR15P49685 360 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 TNNC1P63316 161 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 FCHO2Q0JRZ9 810 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 TRPC3Q13507 836 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 MAPRE1Q15691 268 aaKnown RBP19.39■□□□□ 0.69
CCDC12-208ENST00000603885 DDR2Q16832 855 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 FAM171BQ6P995 826 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 C4orf50Q6ZRC1 276 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 FRMD5Q7Z6J6 570 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 GPIHBP1Q8IV16 184 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 KCTD10Q9H3F6 313 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 OBP2AQ9NY56 170 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 MAGED2Q9UNF1 606 aaPredicted RBP19.39■□□□□ 0.69
CCDC12-208ENST00000603885 F5P12259 2224 aa19.39■□□□□ 0.69
CCDC12-208ENST00000603885 MYBPHLA2RUH7 354 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 PDXKO00764 312 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 CHADO15335 359 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 PHACTR2O75167 634 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 KIF20AO95235 890 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 COL4A2P08572 1712 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 LMO2P25791 158 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 AP3M2P53677 418 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 NLRP12P59046 1061 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 PSMC1P62191 440 aaKnown RBP19.38■□□□□ 0.69
CCDC12-208ENST00000603885 CCDC142Q17RM4 750 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 WDR72Q3MJ13 1102 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 SDHAF4Q5VUM1 108 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 KRBA2Q6ZNG9 492 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 TICRRQ7Z2Z1 1910 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 SLC9A9Q8IVB4 645 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 CSGALNACT1Q8TDX6 532 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 TMEM174Q8WUU8 243 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 ZNF516Q92618 1163 aa19.38■□□□□ 0.69
CCDC12-208ENST00000603885 GZF1Q9H116 711 aaPredicted RBP19.38■□□□□ 0.69
CCDC12-208ENST00000603885 SNX25Q9H3E2 840 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms