RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 ZNF707Q96C28 371 aaPredicted RBP17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 FUBP3Q96I24 572 aaKnown RBP eCLIP17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 NT5C1BQ96P26 610 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 BCO2Q9BYV7 579 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 DNAJC25Q9H1X3 360 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 POMKQ9H5K3 350 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 APOBEC3GQ9HC16 384 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 WDR6Q9NNW5 1121 aaKnown RBP17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 ABCB6Q9NP58 842 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 SLC27A5Q9Y2P5 690 aa17.09■□□□□ 0.33
PPFIA3-213ENST00000602905 UNC80Q8N2C7 3258 aa17.08■□□□□ 0.33
PPFIA3-213ENST00000602905 DENND4AQ7Z401 1863 aa17.08■□□□□ 0.33
PPFIA3-213ENST00000602905 ATP8B3O60423 1300 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 CLUHO75153 1309 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 KCNJ18B7U540 433 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 HAPLN1P10915 354 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 PRKCSHP14314 528 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 TBXAS1P24557 533 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 SSTR3P32745 418 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 ASPAP45381 313 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 RPL10AP62906 217 aaKnown RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 MYL5Q02045 173 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 CYP27A1Q02318 531 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 KCNJ12Q14500 433 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 TAF12Q16514 161 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 FAM171BQ6P995 826 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 C11orf57Q6ZUT1 292 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 GRASPQ7Z6J2 395 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 ITIH5Q86UX2 942 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 IRF2BP1Q8IU81 584 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 MYCBPAPQ8TBZ2 947 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 ACSF2Q96CM8 615 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 RPGRIP1Q96KN7 1286 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 UHRF1Q96T88 793 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 FAM124BQ9H5Z6 455 aaPredicted RBP17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 ASB3Q9Y575 518 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
PPFIA3-213ENST00000602905 MYBPHLA2RUH7 354 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 HCRTO43612 131 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 ATP2C2O75185 946 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 VNN2O95498 520 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 CD58P19256 250 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 EEF1GP26641 437 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 NDST1P52848 882 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 PABPC1LQ4VXU2 614 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 MDH1BQ5I0G3 518 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 CYP4A22Q5TCH4 519 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 OTOP3Q7RTS5 596 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 LEMD2Q8NC56 503 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 B3GALNT2Q8NCR0 500 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 MYLPFQ96A32 169 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 SAMSN1Q9NSI8 373 aaKnown RBP17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 TMLHEQ9NVH6 421 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 CDH22Q9UJ99 828 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 PTPRDP23468 1912 aa17.07■□□□□ 0.32
PPFIA3-213ENST00000602905 SYCE3A1L190 88 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 ZNF197O14709 1029 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 LRRN2O75325 713 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 FSHRP23945 695 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 CDR1P51861 262 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 ZP2Q05996 745 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 INCA1Q0VD86 236 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 LRMPQ12912 555 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 TCP11X2Q5H9J9 407 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 GBP6Q6ZN66 633 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 TTC9BQ8N6N2 239 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 TDRD5Q8NAT2 981 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 EHBP1Q8NDI1 1231 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 TATDN2Q93075 761 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 PKMYT1Q99640 499 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 CORO1BQ9BR76 489 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 MED10Q9BTT4 135 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 CRISPLD1Q9H336 500 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 DPEP3Q9H4B8 488 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 CRTAC1Q9NQ79 661 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 ASAH2Q9NR71 780 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 GCNT4Q9P109 453 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 DNMT3BQ9UBC3 853 aaKnown RBP17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 NCOR1O75376 2440 aa17.06■□□□□ 0.32
PPFIA3-213ENST00000602905 FGF19O95750 216 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 RHOP08100 348 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 CYP2F1P24903 491 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 ANXA13P27216 316 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 GBP2P32456 591 aaPredicted RBP17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 GRIK1P39086 918 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 MAGEA11P43364 429 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 CUL2Q13617 745 aa17.05■□□□□ 0.32
PPFIA3-213ENST00000602905 VWA3BQ502W6 1294 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms