RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SMG5Q9UPR3 1016 aaKnown RBP22.81■■□□□ 1.24
PPFIA3-209ENST00000602783 MYBPHLA2RUH7 354 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 SPECC1L-ADORA2AF8WAN1 911 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 EXTL3O43909 919 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 HUS1O60921 280 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 TDGF1P13385 188 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 CXCL12P48061 93 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 ME1P48163 572 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 AMPD3Q01432 767 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 STXBP4Q6ZWJ1 553 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 PDCL2Q8N4E4 241 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 PI4K2AQ9BTU6 479 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 SMG9Q9H0W8 520 aaKnown RBP22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 PDE11AQ9HCR9 933 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 RBM12Q9NTZ6 932 aaKnown RBP22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 PCDHA7Q9UN72 937 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 L1RE1Q9UN81 338 aa22.8■■□□□ 1.24
PPFIA3-209ENST00000602783 POLR2DO15514 142 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 PRPF40AO75400 957 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 KRT19P08727 400 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 CTHP32929 405 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 GPR15P49685 360 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 SATB1Q01826 763 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 DNM1Q05193 864 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 BFSP1Q12934 665 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 LRRC32Q14392 662 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 GAS6Q14393 721 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 ATL3Q6DD88 541 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 TXNDC11Q6PKC3 985 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 RALGPS2Q86X27 583 aaPredicted RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 CMTM8Q8IZV2 173 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 CELF5Q8N6W0 485 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 SECISBP2LQ93073 1101 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 MAGEF1Q9HAY2 307 aa22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 THG1LQ9NWX6 298 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 DDX43Q9NXZ2 648 aaKnown RBP22.79■■□□□ 1.24
PPFIA3-209ENST00000602783 CEP250Q9BV73 2442 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 HMGA1P17096 107 aaKnown RBP22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 PLCB2Q00722 1185 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 TNK2Q07912 1038 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 NFE2Q16621 373 aaPredicted RBP22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 RESP18Q5W5W9 173 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 CNNM4Q6P4Q7 775 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 TMEM150AQ86TG1 271 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 GPD1LQ8N335 351 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 SPEM1Q8N4L4 309 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 LRRC52Q8N7C0 313 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 CXorf38Q8TB03 319 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 ACBD6Q9BR61 282 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 FAM13BQ9NYF5 915 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 ITGA11Q9UKX5 1188 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 CFAP45Q9UL16 551 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 MAGED2Q9UNF1 606 aaPredicted RBP22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 SNX9Q9Y5X1 595 aa22.78■■□□□ 1.24
PPFIA3-209ENST00000602783 NUP210Q8TEM1 1887 aaPredicted RBP22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 EIF3DO15371 548 aaKnown RBP eCLIP22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 F11P03951 625 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 TMEM191BP0C7N4 346 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 ACAT1P24752 427 aaKnown RBP22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 NLRP12P59046 1061 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 RBP5P82980 135 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 MYL7Q01449 175 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 PON2Q15165 354 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 WDR44Q5JSH3 913 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 DGKKQ5KSL6 1271 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 FAM26FQ5R3K3 315 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 SDHAF4Q5VUM1 108 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 LMBRD2Q68DH5 695 aaPredicted RBP22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 TMEM86AQ8N2M4 240 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 MAB21L3Q8N8X9 362 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 STKLD1Q8NE28 680 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 C7orf25Q9BPX7 421 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 MTMR12Q9C0I1 747 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 ZMYM5Q9UJ78 669 aa22.77■■□□□ 1.24
PPFIA3-209ENST00000602783 CSH1P0DML2 217 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 CSH2P0DML3 217 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 CASP1P29466 404 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 HOXD13P35453 343 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 AVPR1AP37288 418 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 PUM1Q14671 1186 aaKnown RBP eCLIP22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 DDR2Q16832 855 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 ITPRIPL2Q3MIP1 535 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 INTS6LQ5JSJ4 861 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 Q6ZS52 159 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 DGLUCYQ7Z3D6 616 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 OSTM1Q86WC4 334 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 BLZF1Q9H2G9 400 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 GKN1Q9NS71 199 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 GDAP2Q9NXN4 497 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 SIX4Q9UIU6 781 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 GTF3C4Q9UKN8 822 aa22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 R3HCC1Q9Y3T6 440 aaKnown RBP22.76■■□□□ 1.23
PPFIA3-209ENST00000602783 KIAA0391O15091 583 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 CYP2F1P24903 491 aa22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 RPL10AP62906 217 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 TXNDC8Q6A555 127 aa22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 UNC13DQ70J99 1090 aa22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 EPM2AIP1Q7L775 607 aaPredicted RBP22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 GPR161Q8N6U8 529 aaKnown RBP22.75■■□□□ 1.23
PPFIA3-209ENST00000602783 LEO1Q8WVC0 666 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms