RNA–Protein interactions for RNA: ENST00000602398.2

SBNO1-203, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBNO1, Length 4,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-203ENST00000602398 RHOT1Q8IXI2 618 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 OR6P1Q8NGX9 317 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 TBC1D31Q96DN5 1066 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 SCYL1Q96KG9 808 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 KCTD10Q9H3F6 313 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 PLK2Q9NYY3 685 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 CITO14578 2027 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 GOLGA6L7A0A1B0GV03 622 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ARHGEF37A1IGU5 675 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ZSCAN5CA6NGD5 496 aaPredicted RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 F8VP50 259 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 APOEP02649 317 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 TUBB4AP04350 444 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 URODP06132 367 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ODC1P11926 461 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 GTF2BQ00403 316 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 FOXD4Q12950 439 aaPredicted RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 TMED2Q15363 201 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ZNF618Q5T7W0 954 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 PRUNE1Q86TP1 453 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 RNF135Q8IUD6 432 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 SPATA4Q8NEY3 305 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 FAM76AQ8TAV0 307 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 RMDN1Q96DB5 314 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 RPGRIP1Q96KN7 1286 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 RPRD1AQ96P16 312 aaPredicted RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 PLEKHA5Q9HAU0 1116 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ATP8B3O60423 1300 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 M0R2N6 131 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 DDX3XO00571 662 aaKnown RBP eCLIP9.48□□□□□ -0.896e-14■■■■□ 24.2
SBNO1-203ENST00000602398 SART1O43290 800 aaKnown RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 PLA2G6O60733 806 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 GATMP50440 423 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 SPIRE1Q08AE8 756 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 MIIPQ5JXC2 388 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 RNF219Q5W0B1 726 aaPredicted RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 PLPPR4Q7Z2D5 763 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 DDX53Q86TM3 631 aaKnown RBP9.48□□□□□ -0.89
SBNO1-203ENST00000602398 PGBD3Q8N328 593 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 LRRN4CLQ8ND94 238 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 GSDMBQ8TAX9 411 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 RXFP2Q8WXD0 754 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 SLITRK1Q96PX8 696 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 ATXN3LQ9H3M9 355 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 FLRT1Q9NZU1 646 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 SYNPO2Q9UMS6 1093 aa9.48□□□□□ -0.89
SBNO1-203ENST00000602398 MEIS3P2A8K0S8 358 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 TJP3O95049 919 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CPP00450 1065 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 ENOSF1Q7L5Y1 443 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CCDC13Q8IYE1 715 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 SLC25A41Q8N5S1 370 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 OR2W6PQ8NHA6 318 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 SPATA18Q8TC71 538 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 COLEC11Q9BWP8 271 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 ALG13Q9NP73 1137 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 MROH7Q68CQ1 1323 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 LRG1P02750 347 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 DARSP14868 501 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 ADSSP30520 456 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 ARSEP51690 589 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CLCNKBP51801 687 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 EIF3EP60228 445 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CDR2Q01850 454 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CLUL1Q15846 466 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 POM121L1PQ3SYA9 428 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 NT5DC1Q5TFE4 455 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 HEATR6Q6AI08 1181 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 TPGS1Q6ZTW0 290 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 WDR49Q8IV35 697 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 FAM172AQ8WUF8 416 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CFAP57Q96MR6 1250 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 FSD1LQ9BXM9 530 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.47□□□□□ -0.893e-6■■□□□ 14.4
SBNO1-203ENST00000602398 IP6K2Q9UHH9 426 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 TOGARAM1Q9Y4F4 1720 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 PLIN4Q96Q06 1357 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 SLC12A8A0AV02 714 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 PPEF2O14830 753 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 MDM4O15151 490 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CLCN6P51797 869 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 CSE1LP55060 971 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 RPL7AP62424 266 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 SLMAPQ14BN4 828 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 DENND1BQ6P3S1 775 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 FAM81BQ96LP2 452 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 FMO2Q99518 471 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 DHX33Q9H6R0 707 aaKnown RBP9.47□□□□□ -0.89
SBNO1-203ENST00000602398 RAB6BQ9NRW1 208 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 SMIM28A0A1B0GU29 152 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 RBP3P10745 1247 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 OR1D2P34982 312 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 TWF1Q12792 350 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 HHATQ5VTY9 493 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 ZPBP2Q6X784 338 aa9.47□□□□□ -0.89
SBNO1-203ENST00000602398 FAM71DQ8N9W8 422 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms