RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PRR23BQ6ZRT6 265 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 TMEM150AQ86TG1 271 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 CSGALNACT2Q8N6G5 542 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 MAB21L3Q8N8X9 362 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 STKLD1Q8NE28 680 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 FAM84AQ96KN4 292 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 USP28Q96RU2 1077 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 CBWD1Q9BRT8 395 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 PCIF1Q9H4Z3 704 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 PARD6AQ9NPB6 346 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 GKN1Q9NS71 199 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 PANK4Q9NVE7 773 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 C2orf42Q9NWW7 574 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 DDX43Q9NXZ2 648 aaKnown RBP14.16□□□□□ -0.14
RPS28-204ENST00000602140 ZMYM5Q9UJ78 669 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 L1RE1Q9UN81 338 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 MAGED2Q9UNF1 606 aaPredicted RBP14.16□□□□□ -0.14
RPS28-204ENST00000602140 CEP250Q9BV73 2442 aa14.16□□□□□ -0.14
RPS28-204ENST00000602140 FRMD3A2A2Y4 597 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 K7ESF4 209 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 EXTL3O43909 919 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 PRPF6O94906 941 aaKnown RBP14.15□□□□□ -0.14
RPS28-204ENST00000602140 KRT19P08727 400 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 ACAT1P24752 427 aaKnown RBP14.15□□□□□ -0.14
RPS28-204ENST00000602140 AVPR1AP37288 418 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 LMNB2Q03252 620 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 CCINQ13939 588 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 SIM2Q14190 667 aaPredicted RBP14.15□□□□□ -0.14
RPS28-204ENST00000602140 SLC39A14Q15043 492 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 ITPRIPL2Q3MIP1 535 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 SDHAF4Q5VUM1 108 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 HEATR6Q6AI08 1181 aaKnown RBP14.15□□□□□ -0.14
RPS28-204ENST00000602140 LAIR1Q6GTX8 287 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 LRRC52Q8N7C0 313 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 PDILTQ8N807 584 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 CXorf38Q8TB03 319 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 ACBD6Q9BR61 282 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 PDE11AQ9HCR9 933 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 ITGA11Q9UKX5 1188 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 CCL26Q9Y258 94 aa14.15□□□□□ -0.14
RPS28-204ENST00000602140 PRR5-ARHGAP8B1AHC4 643 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 HRO43593 1189 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 PAPSS2O95340 614 aaPredicted RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 CSH1P0DML2 217 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 CSH2P0DML3 217 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 SDHBP21912 280 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 CYP2F1P24903 491 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 DDX6P26196 483 aaKnown RBP eCLIP14.14□□□□□ -0.15
RPS28-204ENST00000602140 RBP5P82980 135 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 ARHGAP8P85298 464 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 MYL7Q01449 175 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 SPEM2Q0P670 501 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 SRSF5Q13243 272 aaKnown RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 DDR2Q16832 855 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 INTS6LQ5JSJ4 861 aaKnown RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 TXNDC8Q6A555 127 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 TRIM68Q6AZZ1 485 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 LONP2Q86WA8 852 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 OSTM1Q86WC4 334 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 TMEM86AQ8N2M4 240 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 LEO1Q8WVC0 666 aaPredicted RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 MRPS31Q92665 395 aaKnown RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 USP13Q92995 863 aaPredicted RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 FAM83CQ9BQN1 747 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 MTMR12Q9C0I1 747 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 TMEM206Q9H813 350 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 FOXD4L1Q9NU39 408 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 TDP1Q9NUW8 608 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 GDAP2Q9NXN4 497 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 SIX4Q9UIU6 781 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 GTF3C4Q9UKN8 822 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 CDV3Q9UKY7 258 aaKnown RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 MTMR6Q9Y217 621 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 SNX9Q9Y5X1 595 aa14.14□□□□□ -0.15
RPS28-204ENST00000602140 MORC2Q9Y6X9 1032 aaPredicted RBP14.14□□□□□ -0.15
RPS28-204ENST00000602140 HCRTO43612 131 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 RETP07949 1114 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 TMEM191BP0C7N4 346 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 HOXC13P31276 330 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 CNR2P34972 360 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 ATXN1P54253 815 aaKnown RBP14.13□□□□□ -0.15
RPS28-204ENST00000602140 RPL10AP62906 217 aaKnown RBP14.13□□□□□ -0.15
RPS28-204ENST00000602140 RUNX3Q13761 415 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 CCDC142Q17RM4 750 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 LMBRD2Q68DH5 695 aaPredicted RBP14.13□□□□□ -0.15
RPS28-204ENST00000602140 MON1AQ86VX9 555 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 CCDC65Q8IXS2 484 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 ADGRF2Q8IZF7 708 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 GPD1LQ8N335 351 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 SYNPOQ8N3V7 929 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 INTS4Q96HW7 963 aaKnown RBP14.13□□□□□ -0.15
RPS28-204ENST00000602140 PKMYT1Q99640 499 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 ZSCAN16Q9H4T2 348 aaPredicted RBP14.13□□□□□ -0.15
RPS28-204ENST00000602140 EBF3Q9H4W6 596 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 KIF9Q9HAQ2 790 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 ABCB6Q9NP58 842 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 HPS4Q9NQG7 708 aa14.13□□□□□ -0.15
RPS28-204ENST00000602140 UXTQ9UBK9 157 aaPredicted RBP14.13□□□□□ -0.15
RPS28-204ENST00000602140 OTOL1A6NHN0 477 aaPredicted RBP14.12□□□□□ -0.15
RPS28-204ENST00000602140 SOBPA7XYQ1 873 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms