RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 PCDHB12Q9Y5F1 795 aa23.44■■□□□ 1.34
SNRNP70-209ENST00000601065 MED7O43513 233 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 PPM1AP35813 382 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 VARS2Q5ST30 1063 aaKnown RBP23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 THEM5Q8N1Q8 247 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 LPIN3Q9BQK8 851 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 SYT15Q9BQS2 421 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 RRAGDQ9NQL2 400 aaPredicted RBP23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 NAGPAQ9UK23 515 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 CDH9Q9ULB4 789 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 NENFQ9UMX5 172 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 PCDHGC3Q9UN70 934 aa23.43■■□□□ 1.34
SNRNP70-209ENST00000601065 GRXCR1A8MXD5 290 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 O00370 1275 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 ATP2C2O75185 946 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 PTPN1P18031 435 aaKnown RBP23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 SSTR3P32745 418 aaPredicted RBP23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 RGS19P49795 217 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 MRPL58Q14197 206 aaKnown RBP23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 RTP2Q5QGT7 225 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 PPP1R26Q5T8A7 1209 aaPredicted RBP23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 KIAA1328Q86T90 577 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 OR10T2Q8NGX3 314 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 PCDHA13Q9Y5I0 950 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 CNGA2Q16280 664 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 ALKBH5Q6P6C2 394 aaKnown RBP23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 TTPALQ9BTX7 342 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 PDCL3Q9H2J4 239 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 LZTFL1Q9NQ48 299 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 CRTAC1Q9NQ79 661 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 FAM49BQ9NUQ9 324 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 TFR2Q9UP52 801 aa23.42■■□□□ 1.34
SNRNP70-209ENST00000601065 GBF1Q92538 1859 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 MYOGP15173 224 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 STILQ15468 1287 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 CCDC142Q17RM4 750 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 USP41Q3LFD5 358 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 CYFIP2Q96F07 1278 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 CHST7Q9NS84 486 aa23.41■■□□□ 1.34
SNRNP70-209ENST00000601065 LINC01553A4QN01 128 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 SOD2P04179 222 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 CYP1A1P04798 512 aaPredicted RBP23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 MAGEA1P43355 309 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 INTS6LQ5JSJ4 861 aaKnown RBP23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 CCDC122Q5T0U0 273 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 ARHGAP17Q68EM7 881 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 LCLAT1Q6UWP7 414 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 TRIM72Q6ZMU5 477 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 DDX53Q86TM3 631 aaKnown RBP23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 PASD1Q8IV76 773 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 C16orf45Q96MC5 204 aaPredicted RBP23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 TMEM209Q96SK2 561 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 TAS2R14Q9NYV8 317 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 TSPAN16Q9UKR8 245 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 NLRC5Q86WI3 1866 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 MYBPHLA2RUH7 354 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 RCCD1A6NED2 376 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 GOLGA6L9A6NEM1 432 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 FGF18O76093 207 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 MICAL2O94851 1124 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 GZMAP12544 262 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 UNGP13051 313 aaPredicted RBP23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 CCDC130P13994 396 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 VAV2P52735 878 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 CLEC16AQ2KHT3 1053 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 MDH1BQ5I0G3 518 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 ZNF280DQ6N043 979 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 FAM171BQ6P995 826 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 PKMYT1Q99640 499 aa23.4■■□□□ 1.34
SNRNP70-209ENST00000601065 ABL1P00519 1130 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 TSPY1Q01534 308 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 CTXN3Q4LDR2 81 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 ANKS3Q6ZW76 656 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 MYCBPAPQ8TBZ2 947 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 SLC2A14Q8TDB8 520 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 LHX5Q9H2C1 402 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 GTF3C4Q9UKN8 822 aa23.39■■□□□ 1.33
SNRNP70-209ENST00000601065 CHD9Q3L8U1 2897 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 TMCO5BA8MYB1 307 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 LSM8O95777 96 aaKnown RBP23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 CDH5P33151 784 aaPredicted RBP23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 BMP8BP34820 402 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 BMPR1AP36894 532 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 ARHGAP25P42331 645 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 NOMO3P69849 1222 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 PLCB3Q01970 1234 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 KRT17Q04695 432 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 GOLGA7BQ2TAP0 167 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 ARHGAP29Q52LW3 1261 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 DENND1BQ6P3S1 775 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 DNAAF5Q86Y56 855 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 KLHL23Q8NBE8 558 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 PCED1BQ96HM7 432 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 HNRNPABQ99729 332 aaKnown RBP23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 HERC2P3Q9BVR0 1158 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 LACRTQ9GZZ8 138 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 CHD7Q9P2D1 2997 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 RWDD3Q9Y3V2 267 aa23.38■■□□□ 1.33
SNRNP70-209ENST00000601065 PCDHA11Q9Y5I1 949 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms