RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SSX2IPQ9Y2D8 614 aa21.77■■□□□ 1.07
PNKP-215ENST00000600910 CDY1Q9Y6F8 540 aa21.77■■□□□ 1.07
PNKP-215ENST00000600910 TRIOBPQ9H2D6 2365 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 MYBPHLA2RUH7 354 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 LILRB3O75022 631 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 CXCL14O95715 111 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 CYP11B1P15538 503 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 BRD2P25440 801 aaKnown RBP21.76■■□□□ 1.07
PNKP-215ENST00000600910 PDE6CP51160 858 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 GSDMDP57764 484 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 CCDC173Q0VFZ6 552 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 MDH1BQ5I0G3 518 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 EPS8L1Q8TE68 723 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 GDPD5Q8WTR4 605 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 FAM49BQ9NUQ9 324 aa21.76■■□□□ 1.07
PNKP-215ENST00000600910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.75■■□□□ 1.07
PNKP-215ENST00000600910 THAP12O43422 761 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 VDRP11473 427 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 SKILP12757 684 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 CDR1P51861 262 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 ARPP19P56211 112 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 BMS1Q14692 1282 aaKnown RBP21.75■■□□□ 1.07
PNKP-215ENST00000600910 SGO2Q562F6 1265 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 PLPP4Q5VZY2 271 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 SLC8B1Q6J4K2 584 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 FAM171BQ6P995 826 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 WDR59Q6PJI9 974 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 NOP9Q86U38 636 aaKnown RBP21.75■■□□□ 1.07
PNKP-215ENST00000600910 LRRTM3Q86VH5 581 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 GLYCTKQ8IVS8 523 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 TFAP2BQ92481 460 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 PKMYT1Q99640 499 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 CLSTN3Q9BQT9 956 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 ZNF576Q9H609 170 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.75■■□□□ 1.07
PNKP-215ENST00000600910 ZNHIT6Q9NWK9 470 aaKnown RBP21.75■■□□□ 1.07
PNKP-215ENST00000600910 KIAA1257Q9ULG3 409 aa21.75■■□□□ 1.07
PNKP-215ENST00000600910 ADAM12O43184 909 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 CPB1P15086 417 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 IRS1P35568 1242 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 PRKCIP41743 596 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 KLHL30Q0D2K2 578 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 SMC1AQ14683 1233 aaKnown RBP21.74■■□□□ 1.07
PNKP-215ENST00000600910 SLC39A12Q504Y0 691 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 HGSNATQ68CP4 663 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 DCP1BQ8IZD4 617 aaKnown RBP21.74■■□□□ 1.07
PNKP-215ENST00000600910 MYCBPAPQ8TBZ2 947 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 MICAL1Q8TDZ2 1067 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 ZNF606Q8WXB4 792 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 PANX2Q96RD6 677 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 ZSWIM1Q9BR11 485 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 HAUS4Q9H6D7 363 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 TMLHEQ9NVH6 421 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 PCDHGC5Q9Y5F6 944 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 IRAK3Q9Y616 596 aa21.74■■□□□ 1.07
PNKP-215ENST00000600910 RFXAPO00287 272 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 FSCN2O14926 492 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 SERPING1P05155 500 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 CCDC130P13994 396 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 OR1D2P34982 312 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 CREMQ03060 361 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 MEA1Q16626 185 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 TDRD12Q587J7 1177 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 PPP1R26Q5T8A7 1209 aaPredicted RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 MRPL43Q8N983 215 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 CYFIP2Q96F07 1278 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 PCED1BQ96HM7 432 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 RXFP1Q9HBX9 757 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 NGRNQ9NPE2 291 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 FNIP2Q9P278 1114 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 NOCTQ9UK39 431 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 TRANK1O15050 2925 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 COL4A4P53420 1690 aaPredicted RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 HIDE1A8MVS5 230 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 TEX28O15482 410 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 CNPP09543 421 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 SSTR3P32745 418 aaPredicted RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 ROR1Q01973 937 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 CYP27A1Q02318 531 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 MAPRE1Q15691 268 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 TAF3Q5VWG9 929 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 SLC20A1Q8WUM9 679 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 DDX1Q92499 740 aaKnown RBP21.73■■□□□ 1.07
PNKP-215ENST00000600910 MYLPFQ96A32 169 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 PPP1R9BQ96SB3 815 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 ARHGAP20Q9P2F6 1191 aa21.73■■□□□ 1.07
PNKP-215ENST00000600910 C2orf71A6NGG8 1288 aa21.72■■□□□ 1.07
PNKP-215ENST00000600910 O00370 1275 aa21.72■■□□□ 1.07
PNKP-215ENST00000600910 SOX1O00570 391 aaPredicted RBP21.72■■□□□ 1.07
PNKP-215ENST00000600910 PLEKP08567 350 aaPredicted RBP21.72■■□□□ 1.07
PNKP-215ENST00000600910 GPR17Q13304 367 aa21.72■■□□□ 1.07
PNKP-215ENST00000600910 SLC2A14Q8TDB8 520 aa21.72■■□□□ 1.07
PNKP-215ENST00000600910 B3GNT5Q9BYG0 378 aa21.72■■□□□ 1.07
PNKP-215ENST00000600910 LMAN2LQ9H0V9 348 aa21.72■■□□□ 1.07
PNKP-215ENST00000600910 BZW2Q9Y6E2 419 aaKnown RBP21.72■■□□□ 1.07
PNKP-215ENST00000600910 WDR27A2RRH5 827 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 CLDN5O00501 218 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 MED7O43513 233 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 LPXNO60711 386 aa21.71■■□□□ 1.07
PNKP-215ENST00000600910 PTMAP06454 111 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms