RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 COG1Q8WTW3 980 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 SCLYQ96I15 445 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 WNT8AQ9H1J5 351 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 RNF216Q9NWF9 866 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 ATP11BQ9Y2G3 1177 aa18.7■□□□□ 0.58
SHKBP1-224ENST00000600718 EFCAB8A8MWE9 144 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 ZNF185O15231 689 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 B3GAT3O94766 335 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 HSPA1AP0DMV8 641 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 HSPA1BP0DMV9 641 aaKnown RBP18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 LHX1P48742 406 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 TUBB4BP68371 445 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 GOLGA7BQ2TAP0 167 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 PPP1R26Q5T8A7 1209 aaPredicted RBP18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 PHLDB2Q86SQ0 1253 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 OSTM1Q86WC4 334 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 C3orf58Q8NDZ4 430 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 C18orf8Q96DM3 657 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 PBKQ96KB5 322 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 PAAF1Q9BRP4 392 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 PPP1R12CQ9BZL4 782 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 DPEP3Q9H4B8 488 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 HESX1Q9UBX0 185 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 CYTH4Q9UIA0 394 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 ANAPC7Q9UJX3 599 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 TBX21Q9UL17 535 aa18.69■□□□□ 0.58
SHKBP1-224ENST00000600718 CTAGE15A4D2H0 777 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 MYO1FO00160 1098 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 TADA3O75528 432 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CTAGE8P0CG41 777 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 SETSIPP0DME0 302 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CXCR5P32302 372 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CYP2C18P33260 490 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 TAP1Q03518 808 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CTAGE6Q86UF2 777 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CTAGE4Q8IX94 777 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 LRRN4CLQ8ND94 238 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 UBA3Q8TBC4 463 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 FEZF2Q8TBJ5 459 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 SPATA18Q8TC71 538 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 PAWRQ96IZ0 340 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CAPZA3Q96KX2 299 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 PSMB7Q99436 277 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 MIS12Q9H081 205 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 TMEM39AQ9NV64 488 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 WDR35Q9P2L0 1181 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 LRFN2Q9ULH4 789 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 TMEM110-MUSTN1A8MSY1 372 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 MIF4GDA9UHW6 222 aaKnown RBP18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 COMTP21964 271 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 GABRB2P47870 512 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 CBX1P83916 185 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 DSC1Q08554 894 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 ZNF268Q14587 947 aaPredicted RBP18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 PTPN20Q4JDL3 420 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 PKDCCQ504Y2 493 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 TIGD5Q53EQ6 642 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 RABGGTAQ92696 567 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 RPGRIP1Q96KN7 1286 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 SELENOOQ9BVL4 669 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 LCMT1Q9UIC8 334 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 DNAH12Q6ZR08 3092 aa18.68■□□□□ 0.58
SHKBP1-224ENST00000600718 TCRBV5S1A1TA0A578 114 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 ARHGEF37A1IGU5 675 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 KCNK3O14649 394 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 CAPN15O75808 1086 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 ODC1P11926 461 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 PAFAH1B1P43034 410 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 GSCP56915 257 aaPredicted RBP18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 PDCLQ13371 301 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 LLGL2Q6P1M3 1020 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 DNAJC24Q6P3W2 148 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 CD300LGQ6UXG3 332 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 ABI1Q8IZP0 508 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 C3orf20Q8ND61 904 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 BTBD6Q96KE9 485 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 CPXM1Q96SM3 734 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 TMEM106CQ9BVX2 250 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 FAM49BQ9NUQ9 324 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 DSEQ9UL01 958 aa18.67■□□□□ 0.58
SHKBP1-224ENST00000600718 HOXA2O43364 376 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 HCRTO43612 131 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 DDHD2O94830 711 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 PFKMP08237 780 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 CLTBP09497 229 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 PTPN1P18031 435 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 RFC2P35250 354 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 SLC1A1P43005 524 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 DNA2P51530 1060 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 PTPROQ16827 1216 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 TCTN1Q2MV58 587 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 CCDC181Q5TID7 509 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 ZNF572Q7Z3I7 529 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 METTL23Q86XA0 190 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 B3GALNT2Q8NCR0 500 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 FAM193BQ96PV7 902 aaPredicted RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 SYNCQ9H7C4 482 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 TBC1D13Q9NVG8 400 aa18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 DDX43Q9NXZ2 648 aaKnown RBP18.66■□□□□ 0.58
SHKBP1-224ENST00000600718 M0QZQ0 153 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms