RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 CLUL1Q15846 466 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 CNKSR3Q6P9H4 555 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 ERICH1Q86X53 443 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 PHF13Q86YI8 300 aaPredicted RBP13.53□□□□□ -0.24
ZNF548-210ENST00000600442 THEM5Q8N1Q8 247 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 MNS1Q8NEH6 495 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 SLC35G2Q8TBE7 412 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 IPO4Q8TEX9 1081 aaKnown RBP13.53□□□□□ -0.24
ZNF548-210ENST00000600442 NKX2-4Q9H2Z4 354 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
ZNF548-210ENST00000600442 PARVAQ9NVD7 372 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 WDR35Q9P2L0 1181 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 NCANO14594 1321 aa13.53□□□□□ -0.24
ZNF548-210ENST00000600442 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
ZNF548-210ENST00000600442 ABHD14A-ACY1A0A1B0GW23 586 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 BUB1O43683 1085 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CYP1A2P05177 515 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 SETSIPP0DME0 302 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 UNGP13051 313 aaPredicted RBP13.52□□□□□ -0.25
ZNF548-210ENST00000600442 TCP1P17987 556 aaKnown RBP13.52□□□□□ -0.25
ZNF548-210ENST00000600442 BRD2P25440 801 aaKnown RBP13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CLCNKBP51801 687 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CKAP4Q07065 602 aaKnown RBP13.52□□□□□ -0.25
ZNF548-210ENST00000600442 UPP1Q16831 310 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 SOWAHAQ2M3V2 549 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 LCLAT1Q6UWP7 414 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 PEX26Q7Z412 305 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 DAAM2Q86T65 1068 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CRYBG2Q8N1P7 616 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 SLC4A11Q8NBS3 891 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 GSTCDQ8NEC7 633 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CPA5Q8WXQ8 436 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CYFIP2Q96F07 1278 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 SENP8Q96LD8 212 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 WDR24Q96S15 920 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 PCDHB18PQ96TA0 734 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 COLEC11Q9BWP8 271 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 THAP2Q9H0W7 228 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 SLC28A3Q9HAS3 691 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 RNF14Q9UBS8 474 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CNOT8Q9UFF9 292 aaKnown RBP13.52□□□□□ -0.25
ZNF548-210ENST00000600442 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.25
ZNF548-210ENST00000600442 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 SAR1BQ9Y6B6 198 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 DUSP10Q9Y6W6 482 aa13.52□□□□□ -0.25
ZNF548-210ENST00000600442 CASTOR2A6NHX0 329 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 M0QYV0 167 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 PALMO75781 387 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 AMHP03971 560 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 ALDH2P05091 517 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 PRLRP16471 622 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 TERF1P54274 439 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 NOMO3P69849 1222 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 ELAVL2Q12926 359 aaKnown RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 RPS6KA1Q15418 735 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 MAPRE1Q15691 268 aaKnown RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 OTOP2Q7RTS6 562 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 DEFB128Q7Z7B8 93 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 RTN4RL1Q86UN2 441 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 PASD1Q8IV76 773 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 MCOLN2Q8IZK6 566 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 PDCL2Q8N4E4 241 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 CEP112Q8N8E3 955 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 UHRF1Q96T88 793 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 MRPL45Q9BRJ2 306 aaKnown RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 PLVAPQ9BX97 442 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 IRX2Q9BZI1 471 aaPredicted RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 SDCBP2Q9H190 292 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 MTIF3Q9H2K0 278 aaKnown RBP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 GOLGA2P5Q9HBQ8 144 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 ACP6Q9NPH0 428 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 AMFRQ9UKV5 643 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.51□□□□□ -0.25
ZNF548-210ENST00000600442 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 SCN5AQ14524 2016 aa13.51□□□□□ -0.25
ZNF548-210ENST00000600442 MEIS3P2A8K0S8 358 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 MIF4GDA9UHW6 222 aaKnown RBP13.5□□□□□ -0.25
ZNF548-210ENST00000600442 MYO1FO00160 1098 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 TADA2AO75478 443 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 MTA2O94776 668 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 MMP8P22894 467 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 CDH5P33151 784 aaPredicted RBP13.5□□□□□ -0.25
ZNF548-210ENST00000600442 PAFAH1B1P43034 410 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 OR1G1P47890 313 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 ARHGAP17Q68EM7 881 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 C11orf63Q6NUN7 778 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 DNAJC24Q6P3W2 148 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 LIMS2Q7Z4I7 341 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 ACOT1Q86TX2 421 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 UBL4BQ8N7F7 174 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 TPCN2Q8NHX9 752 aa13.5□□□□□ -0.25
ZNF548-210ENST00000600442 ZNF564Q8TBZ8 553 aaPredicted RBP13.5□□□□□ -0.25
ZNF548-210ENST00000600442 SCLYQ96I15 445 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms