RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.13■□□□□ 0.01
SYMPK-215ENST00000600237 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 AKAP10O43572 662 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 MED24O75448 989 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 NDUFS3O75489 264 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 SRP72O76094 671 aaKnown RBP15.13■□□□□ 0.01
SYMPK-215ENST00000600237 HIST1H2AGP0C0S8 130 aaPredicted RBP15.13■□□□□ 0.01
SYMPK-215ENST00000600237 HIST1H2ADP20671 130 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 MCL1Q07820 350 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 SLC30A9Q6PML9 568 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 FAM71DQ8N9W8 422 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 CAVIN3Q969G5 261 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 HIST1H2AHQ96KK5 128 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 HIST1H2AJQ99878 128 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 H2AFJQ9BTM1 129 aa15.13■□□□□ 0.01
SYMPK-215ENST00000600237 MTIF3Q9H2K0 278 aaKnown RBP15.13■□□□□ 0.01
SYMPK-215ENST00000600237 DMGDHQ9UI17 866 aaKnown RBP15.13■□□□□ 0.01
SYMPK-215ENST00000600237 GRAP2O75791 330 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ICAM1P05362 532 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 GARTP22102 1010 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 FDFT1P37268 417 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 PTGER2P43116 358 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 CTCFP49711 727 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 HERVK_113P62684 666 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 RPS6P62753 249 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 NFIAQ12857 509 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 SMTNL2Q2TAL5 461 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 AASDHQ4L235 1098 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 EPC2Q52LR7 807 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ZKSCAN4Q969J2 545 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 NAT9Q9BTE0 207 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■□□□□ 9.3
SYMPK-215ENST00000600237 AIM2O14862 343 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 HNRNPRO43390 633 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 PDGFRBP09619 1106 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 HNRNPH1P31943 449 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 VHLP40337 213 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 PNPLA4P41247 253 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 COBLL1Q53SF7 1204 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ARID3BQ8IVW6 561 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 C1orf131Q8NDD1 294 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 HPDLQ96IR7 371 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ZNF518BQ9C0D4 1074 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 FAM49BQ9NUQ9 324 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 GID8Q9NWU2 228 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 KIAA1257Q9ULG3 409 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 COL5A2P05997 1499 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 PTK6Q13882 451 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 CYB5D1Q6P9G0 228 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ZNF669Q96BR6 464 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 OTUB1Q96FW1 271 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 NOD2Q9HC29 1040 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 PRDM5Q9NQX1 630 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 METTL5Q9NRN9 209 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ARHGAP20Q9P2F6 1191 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 SLC30A1Q9Y6M5 507 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 BCL9O00512 1426 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 KDM4FA0A1W2PPD8 638 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 UBE2Q2LH0YL09 131 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 O00370 1275 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 OGTO15294 1046 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ACADSP16219 412 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 CXCL9Q07325 125 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 GIT2Q14161 759 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 CHI3L2Q15782 390 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 RRM2BQ7LG56 351 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 PRPF39Q86UA1 669 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 MFN1Q8IWA4 741 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ZNF555Q8NEP9 628 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 TMC2Q8TDI7 906 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 ATP8B4Q8TF62 1192 aa15.12■□□□□ 0.01
SYMPK-215ENST00000600237 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 AFF4Q9UHB7 1163 aaKnown RBP15.12■□□□□ 0.01
SYMPK-215ENST00000600237 BRD2P25440 801 aaKnown RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 PCYT1AP49585 367 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 IRX1P78414 480 aaPredicted RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 LAMC2Q13753 1193 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 LRRC36Q1X8D7 754 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 PABPC5Q96DU9 382 aaKnown RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 ZMAT2Q96NC0 199 aaKnown RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 EHD4Q9H223 541 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 CXorf56Q9H5V9 222 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 ACCSLQ4AC99 568 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 TMEM154Q6P9G4 183 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 PATL1Q86TB9 770 aaKnown RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 LINC00523Q86TU6 105 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 SUGP1Q8IWZ8 645 aaKnown RBP15.11■□□□□ 0.01
SYMPK-215ENST00000600237 SHCBP1Q8NEM2 672 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 DCUN1D1Q96GG9 259 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 PPP2R3BQ9Y5P8 575 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 IL1R1P14778 569 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 CYP11B1P15538 503 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 KCNA4P22459 653 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 ERFP50548 548 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 COPAP53621 1224 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 DCAF6Q58WW2 860 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 MEI1Q5TIA1 1274 aa15.11■□□□□ 0.01
SYMPK-215ENST00000600237 FBXO25Q8TCJ0 367 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms