RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 OBP2AQ9NY56 170 aa20.14■□□□□ 0.81
PNKP-213ENST00000599543 R3HCC1Q9Y3T6 440 aaKnown RBP20.14■□□□□ 0.81
PNKP-213ENST00000599543 A0A1B0GVL5 298 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 KIAA0391O15091 583 aaKnown RBP20.13■□□□□ 0.81
PNKP-213ENST00000599543 POLR2DO15514 142 aaKnown RBP20.13■□□□□ 0.81
PNKP-213ENST00000599543 ID4P47928 161 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 AMPD3Q01432 767 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 MYL7Q01449 175 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 E2F4Q16254 413 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 KIAA2013Q8IYS2 634 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 TMEM86AQ8N2M4 240 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 SUMF1Q8NBK3 374 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 ZBTB44Q8NCP5 570 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 ANKRD36BP1Q96IX9 119 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 ACBD6Q9BR61 282 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 FAM126AQ9BYI3 521 aaPredicted RBP20.13■□□□□ 0.81
PNKP-213ENST00000599543 IL21Q9HBE4 155 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 KBTBD4Q9NVX7 518 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 DDX43Q9NXZ2 648 aaKnown RBP20.13■□□□□ 0.81
PNKP-213ENST00000599543 ZMYM5Q9UJ78 669 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 L1RE1Q9UN81 338 aa20.13■□□□□ 0.81
PNKP-213ENST00000599543 PRPF40AO75400 957 aaKnown RBP20.12■□□□□ 0.81
PNKP-213ENST00000599543 PRAMEF12O95522 483 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 WEE1P30291 646 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 ASIC1P78348 528 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 RBP5P82980 135 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 PLCB2Q00722 1185 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 BPIFB1Q8TDL5 484 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 ZFYVE19Q96K21 471 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 FAM84AQ96KN4 292 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 PI4K2AQ9BTU6 479 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 TRIM9Q9C026 710 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 TMLHEQ9NVH6 421 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 FAM13BQ9NYF5 915 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 SNX9Q9Y5X1 595 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 CACNA1AO00555 2505 aa20.12■□□□□ 0.81
PNKP-213ENST00000599543 PFKFB1P16118 471 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 CASP1P29466 404 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 AVPR1AP37288 418 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 SOX9P48436 509 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 CCR3P51677 355 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 FOXK2Q01167 660 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 MYO1EQ12965 1108 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 LRRC32Q14392 662 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 INTS6LQ5JSJ4 861 aaKnown RBP20.11■□□□□ 0.81
PNKP-213ENST00000599543 GRAMD1CQ8IYS0 662 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 ADGRF2Q8IZF7 708 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 TOP6BLQ8N6T0 577 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 CELF5Q8N6W0 485 aaKnown RBP20.11■□□□□ 0.81
PNKP-213ENST00000599543 IQUBQ8NA54 791 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 GLIS3Q8NEA6 775 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 CXorf38Q8TB03 319 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 SPATA18Q8TC71 538 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 NELL1Q92832 810 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 HPS3Q969F9 1004 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 LRRC3BQ96PB8 259 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 SCAND2PQ9GZW5 306 aaPredicted RBP20.11■□□□□ 0.81
PNKP-213ENST00000599543 SMG9Q9H0W8 520 aaKnown RBP20.11■□□□□ 0.81
PNKP-213ENST00000599543 THG1LQ9NWX6 298 aaKnown RBP20.11■□□□□ 0.81
PNKP-213ENST00000599543 GDAP2Q9NXN4 497 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 GTSE1Q9NYZ3 720 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 NCDNQ9UBB6 729 aa20.11■□□□□ 0.81
PNKP-213ENST00000599543 CIZ1Q9ULV3 898 aaPredicted RBP20.11■□□□□ 0.81
PNKP-213ENST00000599543 MYBPHLA2RUH7 354 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 ZNF233A6NK53 670 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 SPECC1L-ADORA2AF8WAN1 911 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 EIF3DO15371 548 aaKnown RBP eCLIP20.1■□□□□ 0.81
PNKP-213ENST00000599543 TNNC2P02585 160 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 CHRNB1P11230 501 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 ACAT1P24752 427 aaKnown RBP20.1■□□□□ 0.81
PNKP-213ENST00000599543 CTHP32929 405 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 NRLP54845 237 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 NLRP12P59046 1061 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 SURF1Q15526 300 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 LMBRD2Q68DH5 695 aaPredicted RBP20.1■□□□□ 0.81
PNKP-213ENST00000599543 MAMSTRQ6ZN01 415 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 RALGPS2Q86X27 583 aaPredicted RBP20.1■□□□□ 0.81
PNKP-213ENST00000599543 CMTM8Q8IZV2 173 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 TTC8Q8TAM2 541 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 SLC46A2Q9BY10 475 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 EPC1Q9H2F5 836 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 GOLPH3LQ9H4A5 285 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 ABCB6Q9NP58 842 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 INTS13Q9NVM9 706 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 HSPBP1Q9NZL4 362 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 SERTAD1Q9UHV2 236 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 SIX4Q9UIU6 781 aa20.1■□□□□ 0.81
PNKP-213ENST00000599543 MAGED2Q9UNF1 606 aaPredicted RBP20.1■□□□□ 0.81
PNKP-213ENST00000599543 SMG5Q9UPR3 1016 aaKnown RBP20.1■□□□□ 0.81
PNKP-213ENST00000599543 LILRB5O75023 590 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 CSH1P0DML2 217 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 CSH2P0DML3 217 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 HMGA1P17096 107 aaKnown RBP20.09■□□□□ 0.81
PNKP-213ENST00000599543 DDX6P26196 483 aaKnown RBP eCLIP20.09■□□□□ 0.81
PNKP-213ENST00000599543 PCSK1P29120 753 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 LHX1P48742 406 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 GPR15P49685 360 aa20.09■□□□□ 0.81
PNKP-213ENST00000599543 RPL10AP62906 217 aaKnown RBP20.09■□□□□ 0.81
PNKP-213ENST00000599543 TMEM150AQ86TG1 271 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms